Characterization of the complete chloroplast genome sequence of Deutzia glabrata (Saxifragaceae)

Deutzia glabrata belongs to the Saxifragaceae, usually perennial herbs, shrubs. The cpDNA of Deutzia glabrata was 157,283 bp long with a large single-copy region (LSC) of 86,839 bp and a small single-copy region(SSC) of 18,748 bp separated by a pair of inverted repeat regions (IRs) of 25,848 bp. It...

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Detalles Bibliográficos
Autores principales: Yang, Qian, Xin, Cheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748543/
https://www.ncbi.nlm.nih.gov/pubmed/33366740
http://dx.doi.org/10.1080/23802359.2020.1715862
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author Yang, Qian
Xin, Cheng
author_facet Yang, Qian
Xin, Cheng
author_sort Yang, Qian
collection PubMed
description Deutzia glabrata belongs to the Saxifragaceae, usually perennial herbs, shrubs. The cpDNA of Deutzia glabrata was 157,283 bp long with a large single-copy region (LSC) of 86,839 bp and a small single-copy region(SSC) of 18,748 bp separated by a pair of inverted repeat regions (IRs) of 25,848 bp. It contains 131 genes, including 85 protein-coding genes, 38 tRNA genes, 8 rRNA genes, of which 16 genes are duplicated in the IRs. The overall GC content is 37.6%. The phylogenetic tree indicates that Deutzia species formed a monophyletic lineage with high bootstrap value. This study has provided new genome information for the phylogenetic analysis of Saxifragaceae.
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spelling pubmed-77485432020-12-22 Characterization of the complete chloroplast genome sequence of Deutzia glabrata (Saxifragaceae) Yang, Qian Xin, Cheng Mitochondrial DNA B Resour Mitogenome Announcement Deutzia glabrata belongs to the Saxifragaceae, usually perennial herbs, shrubs. The cpDNA of Deutzia glabrata was 157,283 bp long with a large single-copy region (LSC) of 86,839 bp and a small single-copy region(SSC) of 18,748 bp separated by a pair of inverted repeat regions (IRs) of 25,848 bp. It contains 131 genes, including 85 protein-coding genes, 38 tRNA genes, 8 rRNA genes, of which 16 genes are duplicated in the IRs. The overall GC content is 37.6%. The phylogenetic tree indicates that Deutzia species formed a monophyletic lineage with high bootstrap value. This study has provided new genome information for the phylogenetic analysis of Saxifragaceae. Taylor & Francis 2020-01-21 /pmc/articles/PMC7748543/ /pubmed/33366740 http://dx.doi.org/10.1080/23802359.2020.1715862 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Qian
Xin, Cheng
Characterization of the complete chloroplast genome sequence of Deutzia glabrata (Saxifragaceae)
title Characterization of the complete chloroplast genome sequence of Deutzia glabrata (Saxifragaceae)
title_full Characterization of the complete chloroplast genome sequence of Deutzia glabrata (Saxifragaceae)
title_fullStr Characterization of the complete chloroplast genome sequence of Deutzia glabrata (Saxifragaceae)
title_full_unstemmed Characterization of the complete chloroplast genome sequence of Deutzia glabrata (Saxifragaceae)
title_short Characterization of the complete chloroplast genome sequence of Deutzia glabrata (Saxifragaceae)
title_sort characterization of the complete chloroplast genome sequence of deutzia glabrata (saxifragaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748543/
https://www.ncbi.nlm.nih.gov/pubmed/33366740
http://dx.doi.org/10.1080/23802359.2020.1715862
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AT xincheng characterizationofthecompletechloroplastgenomesequenceofdeutziaglabratasaxifragaceae

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