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Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China
We sequenced the complete mitochondrial genome (mitogenome) of Mustela sibirica in China by the shotgun genome skimming methods. The mitogenome of M. sibirica is 16,558bp in length with the base composition of 32.9% A, 27.3% T, 26.0% C, and 13.9% G, and consists of 13 protein-coding genes (PCGs), 22...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748545/ https://www.ncbi.nlm.nih.gov/pubmed/33366884 http://dx.doi.org/10.1080/23802359.2020.1723447 |
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author | Gao, Wei Lu, Zhihao Liang, Yukang Ren, Zhu-Mei |
author_facet | Gao, Wei Lu, Zhihao Liang, Yukang Ren, Zhu-Mei |
author_sort | Gao, Wei |
collection | PubMed |
description | We sequenced the complete mitochondrial genome (mitogenome) of Mustela sibirica in China by the shotgun genome skimming methods. The mitogenome of M. sibirica is 16,558bp in length with the base composition of 32.9% A, 27.3% T, 26.0% C, and 13.9% G, and consists of 13 protein-coding genes (PCGs), 22 tRNAs, two rRNAs, and one non-coding control region. The 13 PCGs use ATG as initiation codons except ND3, ND5 and ND2 which initiate with codons ATA and ATT, respectively. Four (COX3, ND1, ND2 and ND4) of the 13 PCGs terminate with a single T– –, and the remainder with a TAA termination codon except ND3 and CYT B using TA– and AGA as termination codon. The phylogenetic tree based on 13 protein-coding genes indicated that M. sibirica is sister to the clade grouped with three species M. nigripes, M. eversmannii, and M. putorius, and Mustelinae species formed a monophyletic group, which is close to the Lutrinae clade within Mustelidae. |
format | Online Article Text |
id | pubmed-7748545 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77485452020-12-22 Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China Gao, Wei Lu, Zhihao Liang, Yukang Ren, Zhu-Mei Mitochondrial DNA B Resour Mitogenome Announcement We sequenced the complete mitochondrial genome (mitogenome) of Mustela sibirica in China by the shotgun genome skimming methods. The mitogenome of M. sibirica is 16,558bp in length with the base composition of 32.9% A, 27.3% T, 26.0% C, and 13.9% G, and consists of 13 protein-coding genes (PCGs), 22 tRNAs, two rRNAs, and one non-coding control region. The 13 PCGs use ATG as initiation codons except ND3, ND5 and ND2 which initiate with codons ATA and ATT, respectively. Four (COX3, ND1, ND2 and ND4) of the 13 PCGs terminate with a single T– –, and the remainder with a TAA termination codon except ND3 and CYT B using TA– and AGA as termination codon. The phylogenetic tree based on 13 protein-coding genes indicated that M. sibirica is sister to the clade grouped with three species M. nigripes, M. eversmannii, and M. putorius, and Mustelinae species formed a monophyletic group, which is close to the Lutrinae clade within Mustelidae. Taylor & Francis 2020-02-07 /pmc/articles/PMC7748545/ /pubmed/33366884 http://dx.doi.org/10.1080/23802359.2020.1723447 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Gao, Wei Lu, Zhihao Liang, Yukang Ren, Zhu-Mei Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China |
title | Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China |
title_full | Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China |
title_fullStr | Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China |
title_full_unstemmed | Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China |
title_short | Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China |
title_sort | complete mitochondrial genome of mustela sibirica (carnivora: mustelidae), a protected and endangered species in china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748545/ https://www.ncbi.nlm.nih.gov/pubmed/33366884 http://dx.doi.org/10.1080/23802359.2020.1723447 |
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