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Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China

We sequenced the complete mitochondrial genome (mitogenome) of Mustela sibirica in China by the shotgun genome skimming methods. The mitogenome of M. sibirica is 16,558bp in length with the base composition of 32.9% A, 27.3% T, 26.0% C, and 13.9% G, and consists of 13 protein-coding genes (PCGs), 22...

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Autores principales: Gao, Wei, Lu, Zhihao, Liang, Yukang, Ren, Zhu-Mei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748545/
https://www.ncbi.nlm.nih.gov/pubmed/33366884
http://dx.doi.org/10.1080/23802359.2020.1723447
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author Gao, Wei
Lu, Zhihao
Liang, Yukang
Ren, Zhu-Mei
author_facet Gao, Wei
Lu, Zhihao
Liang, Yukang
Ren, Zhu-Mei
author_sort Gao, Wei
collection PubMed
description We sequenced the complete mitochondrial genome (mitogenome) of Mustela sibirica in China by the shotgun genome skimming methods. The mitogenome of M. sibirica is 16,558bp in length with the base composition of 32.9% A, 27.3% T, 26.0% C, and 13.9% G, and consists of 13 protein-coding genes (PCGs), 22 tRNAs, two rRNAs, and one non-coding control region. The 13 PCGs use ATG as initiation codons except ND3, ND5 and ND2 which initiate with codons ATA and ATT, respectively. Four (COX3, ND1, ND2 and ND4) of the 13 PCGs terminate with a single T– –, and the remainder with a TAA termination codon except ND3 and CYT B using TA– and AGA as termination codon. The phylogenetic tree based on 13 protein-coding genes indicated that M. sibirica is sister to the clade grouped with three species M. nigripes, M. eversmannii, and M. putorius, and Mustelinae species formed a monophyletic group, which is close to the Lutrinae clade within Mustelidae.
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spelling pubmed-77485452020-12-22 Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China Gao, Wei Lu, Zhihao Liang, Yukang Ren, Zhu-Mei Mitochondrial DNA B Resour Mitogenome Announcement We sequenced the complete mitochondrial genome (mitogenome) of Mustela sibirica in China by the shotgun genome skimming methods. The mitogenome of M. sibirica is 16,558bp in length with the base composition of 32.9% A, 27.3% T, 26.0% C, and 13.9% G, and consists of 13 protein-coding genes (PCGs), 22 tRNAs, two rRNAs, and one non-coding control region. The 13 PCGs use ATG as initiation codons except ND3, ND5 and ND2 which initiate with codons ATA and ATT, respectively. Four (COX3, ND1, ND2 and ND4) of the 13 PCGs terminate with a single T– –, and the remainder with a TAA termination codon except ND3 and CYT B using TA– and AGA as termination codon. The phylogenetic tree based on 13 protein-coding genes indicated that M. sibirica is sister to the clade grouped with three species M. nigripes, M. eversmannii, and M. putorius, and Mustelinae species formed a monophyletic group, which is close to the Lutrinae clade within Mustelidae. Taylor & Francis 2020-02-07 /pmc/articles/PMC7748545/ /pubmed/33366884 http://dx.doi.org/10.1080/23802359.2020.1723447 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Gao, Wei
Lu, Zhihao
Liang, Yukang
Ren, Zhu-Mei
Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China
title Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China
title_full Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China
title_fullStr Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China
title_full_unstemmed Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China
title_short Complete mitochondrial genome of Mustela sibirica (Carnivora: Mustelidae), a protected and endangered species in China
title_sort complete mitochondrial genome of mustela sibirica (carnivora: mustelidae), a protected and endangered species in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748545/
https://www.ncbi.nlm.nih.gov/pubmed/33366884
http://dx.doi.org/10.1080/23802359.2020.1723447
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