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The complete chloroplast genome of Pertya phylicoides (Asteraceae, Pertyeae): a shurby endemic species from China

This study was the first report about complete chloroplast genome of Pertya phylicoides (Asteraceae: Pertyeae), a critically shurby plant. The complete chloroplast genome of Pertya phylicoides was 153,379 bp in length and a typical circular structure, which comprises a pair of inverted repeat (IR) r...

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Autores principales: Wang, Bin, Zhao, Qing, Wang, Xiu-Hua, Fu, Zhi-Xi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748547/
https://www.ncbi.nlm.nih.gov/pubmed/33366828
http://dx.doi.org/10.1080/23802359.2020.1722763
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author Wang, Bin
Zhao, Qing
Wang, Xiu-Hua
Fu, Zhi-Xi
author_facet Wang, Bin
Zhao, Qing
Wang, Xiu-Hua
Fu, Zhi-Xi
author_sort Wang, Bin
collection PubMed
description This study was the first report about complete chloroplast genome of Pertya phylicoides (Asteraceae: Pertyeae), a critically shurby plant. The complete chloroplast genome of Pertya phylicoides was 153,379 bp in length and a typical circular structure, which comprises a pair of inverted repeat (IR) region of 25,191 bp divided by a large single-copy (LSC) region of 84,535 bp and a small single-copy (SSC) region of 18,462 bp. The general GC content was 37.6% in the whole sequence, whereas corresponding values of 35.6%, 31.2%, and 43.1% in the LSC, SSC, and IR regions, respectively. The whole genome contained 113 unique genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 tRNA genes. The phylogenetic hypotheses obtained based on the analyses of 21 cp genomes indicates Pertya phylicoides was supported as a sister group to the tribe Carduoideae.
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spelling pubmed-77485472020-12-22 The complete chloroplast genome of Pertya phylicoides (Asteraceae, Pertyeae): a shurby endemic species from China Wang, Bin Zhao, Qing Wang, Xiu-Hua Fu, Zhi-Xi Mitochondrial DNA B Resour Mitogenome Announcement This study was the first report about complete chloroplast genome of Pertya phylicoides (Asteraceae: Pertyeae), a critically shurby plant. The complete chloroplast genome of Pertya phylicoides was 153,379 bp in length and a typical circular structure, which comprises a pair of inverted repeat (IR) region of 25,191 bp divided by a large single-copy (LSC) region of 84,535 bp and a small single-copy (SSC) region of 18,462 bp. The general GC content was 37.6% in the whole sequence, whereas corresponding values of 35.6%, 31.2%, and 43.1% in the LSC, SSC, and IR regions, respectively. The whole genome contained 113 unique genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 tRNA genes. The phylogenetic hypotheses obtained based on the analyses of 21 cp genomes indicates Pertya phylicoides was supported as a sister group to the tribe Carduoideae. Taylor & Francis 2020-01-31 /pmc/articles/PMC7748547/ /pubmed/33366828 http://dx.doi.org/10.1080/23802359.2020.1722763 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Bin
Zhao, Qing
Wang, Xiu-Hua
Fu, Zhi-Xi
The complete chloroplast genome of Pertya phylicoides (Asteraceae, Pertyeae): a shurby endemic species from China
title The complete chloroplast genome of Pertya phylicoides (Asteraceae, Pertyeae): a shurby endemic species from China
title_full The complete chloroplast genome of Pertya phylicoides (Asteraceae, Pertyeae): a shurby endemic species from China
title_fullStr The complete chloroplast genome of Pertya phylicoides (Asteraceae, Pertyeae): a shurby endemic species from China
title_full_unstemmed The complete chloroplast genome of Pertya phylicoides (Asteraceae, Pertyeae): a shurby endemic species from China
title_short The complete chloroplast genome of Pertya phylicoides (Asteraceae, Pertyeae): a shurby endemic species from China
title_sort complete chloroplast genome of pertya phylicoides (asteraceae, pertyeae): a shurby endemic species from china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748547/
https://www.ncbi.nlm.nih.gov/pubmed/33366828
http://dx.doi.org/10.1080/23802359.2020.1722763
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