The complete chloroplast genome of Hemerocallis citrina (Asphodelaceae), an ornamental and medicinal plant

Hemerocallis citrina (Asphodelaceae) has been wildly cultivated as ornamental and medicinal plant. Here, we reported the first chloroplast genome sequence of H. citrina. The chloroplast genome size is 156,088 bp with GC content of 37.3%, including a large single-copy (LSC) of 84,843 bp, a small sing...

Descripción completa

Detalles Bibliográficos
Autores principales: Ou, Xiaobin, Liu, Ge, Wu, Li-Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748551/
https://www.ncbi.nlm.nih.gov/pubmed/33366896
http://dx.doi.org/10.1080/23802359.2020.1726227
_version_ 1783625137731403776
author Ou, Xiaobin
Liu, Ge
Wu, Li-Hong
author_facet Ou, Xiaobin
Liu, Ge
Wu, Li-Hong
author_sort Ou, Xiaobin
collection PubMed
description Hemerocallis citrina (Asphodelaceae) has been wildly cultivated as ornamental and medicinal plant. Here, we reported the first chloroplast genome sequence of H. citrina. The chloroplast genome size is 156,088 bp with GC content of 37.3%, including a large single-copy (LSC) of 84,843 bp, a small single-copy (SSC) of 18,507 bp, and a pair of 26,369 bp IR(inverted repeat) regions. A total of 133 genes were annotated including 87 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The phylogenetic analysis revealed that H. citrina belongs to the Hemerocallis genus in Asphodelaceae family.
format Online
Article
Text
id pubmed-7748551
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77485512020-12-22 The complete chloroplast genome of Hemerocallis citrina (Asphodelaceae), an ornamental and medicinal plant Ou, Xiaobin Liu, Ge Wu, Li-Hong Mitochondrial DNA B Resour Mitogenome Announcement Hemerocallis citrina (Asphodelaceae) has been wildly cultivated as ornamental and medicinal plant. Here, we reported the first chloroplast genome sequence of H. citrina. The chloroplast genome size is 156,088 bp with GC content of 37.3%, including a large single-copy (LSC) of 84,843 bp, a small single-copy (SSC) of 18,507 bp, and a pair of 26,369 bp IR(inverted repeat) regions. A total of 133 genes were annotated including 87 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The phylogenetic analysis revealed that H. citrina belongs to the Hemerocallis genus in Asphodelaceae family. Taylor & Francis 2020-02-11 /pmc/articles/PMC7748551/ /pubmed/33366896 http://dx.doi.org/10.1080/23802359.2020.1726227 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ou, Xiaobin
Liu, Ge
Wu, Li-Hong
The complete chloroplast genome of Hemerocallis citrina (Asphodelaceae), an ornamental and medicinal plant
title The complete chloroplast genome of Hemerocallis citrina (Asphodelaceae), an ornamental and medicinal plant
title_full The complete chloroplast genome of Hemerocallis citrina (Asphodelaceae), an ornamental and medicinal plant
title_fullStr The complete chloroplast genome of Hemerocallis citrina (Asphodelaceae), an ornamental and medicinal plant
title_full_unstemmed The complete chloroplast genome of Hemerocallis citrina (Asphodelaceae), an ornamental and medicinal plant
title_short The complete chloroplast genome of Hemerocallis citrina (Asphodelaceae), an ornamental and medicinal plant
title_sort complete chloroplast genome of hemerocallis citrina (asphodelaceae), an ornamental and medicinal plant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748551/
https://www.ncbi.nlm.nih.gov/pubmed/33366896
http://dx.doi.org/10.1080/23802359.2020.1726227
work_keys_str_mv AT ouxiaobin thecompletechloroplastgenomeofhemerocalliscitrinaasphodelaceaeanornamentalandmedicinalplant
AT liuge thecompletechloroplastgenomeofhemerocalliscitrinaasphodelaceaeanornamentalandmedicinalplant
AT wulihong thecompletechloroplastgenomeofhemerocalliscitrinaasphodelaceaeanornamentalandmedicinalplant
AT ouxiaobin completechloroplastgenomeofhemerocalliscitrinaasphodelaceaeanornamentalandmedicinalplant
AT liuge completechloroplastgenomeofhemerocalliscitrinaasphodelaceaeanornamentalandmedicinalplant
AT wulihong completechloroplastgenomeofhemerocalliscitrinaasphodelaceaeanornamentalandmedicinalplant

Ejemplares similares