The complete chloroplast genome of Tibetan medicine Gentianopsis paludosa

Gentianopsis paludosa (Mum.) Ma is an important species in Tibetan folk medicine, but its wild populations are shrinking roughly due to the increasing demand for it. Gentianopsis paludosa is presently at risk of over-exploitation, so it needs urgent conservation. Here, we report the complete sequenc...

Descripción completa

Detalles Bibliográficos
Autores principales: Yang, Lucun, Xiong, Feng, Xiao, Yuanming, Li, Jingjing, Chen, Chen, Li, Changbin, Wang, Lingling, Zhou, Guoying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748554/
https://www.ncbi.nlm.nih.gov/pubmed/33366712
http://dx.doi.org/10.1080/23802359.2020.1714494
_version_ 1783625138451775488
author Yang, Lucun
Xiong, Feng
Xiao, Yuanming
Li, Jingjing
Chen, Chen
Li, Changbin
Wang, Lingling
Zhou, Guoying
author_facet Yang, Lucun
Xiong, Feng
Xiao, Yuanming
Li, Jingjing
Chen, Chen
Li, Changbin
Wang, Lingling
Zhou, Guoying
author_sort Yang, Lucun
collection PubMed
description Gentianopsis paludosa (Mum.) Ma is an important species in Tibetan folk medicine, but its wild populations are shrinking roughly due to the increasing demand for it. Gentianopsis paludosa is presently at risk of over-exploitation, so it needs urgent conservation. Here, we report the complete sequence of the chloroplast genome of G. paludosa. The genome was 51,121 bp in length with 129 genes comprising 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The overall GC content of G. paludosa chloroplast genome was is 36.67%. The phylogenomic analysis suggested that G. paludosa forms a clade with species in Halenia and Swertia, indicating that the G. paludosa is more closely related to Halenia and Swertia than that of Gentiana.
format Online
Article
Text
id pubmed-7748554
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77485542020-12-22 The complete chloroplast genome of Tibetan medicine Gentianopsis paludosa Yang, Lucun Xiong, Feng Xiao, Yuanming Li, Jingjing Chen, Chen Li, Changbin Wang, Lingling Zhou, Guoying Mitochondrial DNA B Resour Mitogenome Announcement Gentianopsis paludosa (Mum.) Ma is an important species in Tibetan folk medicine, but its wild populations are shrinking roughly due to the increasing demand for it. Gentianopsis paludosa is presently at risk of over-exploitation, so it needs urgent conservation. Here, we report the complete sequence of the chloroplast genome of G. paludosa. The genome was 51,121 bp in length with 129 genes comprising 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The overall GC content of G. paludosa chloroplast genome was is 36.67%. The phylogenomic analysis suggested that G. paludosa forms a clade with species in Halenia and Swertia, indicating that the G. paludosa is more closely related to Halenia and Swertia than that of Gentiana. Taylor & Francis 2020-01-20 /pmc/articles/PMC7748554/ /pubmed/33366712 http://dx.doi.org/10.1080/23802359.2020.1714494 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Lucun
Xiong, Feng
Xiao, Yuanming
Li, Jingjing
Chen, Chen
Li, Changbin
Wang, Lingling
Zhou, Guoying
The complete chloroplast genome of Tibetan medicine Gentianopsis paludosa
title The complete chloroplast genome of Tibetan medicine Gentianopsis paludosa
title_full The complete chloroplast genome of Tibetan medicine Gentianopsis paludosa
title_fullStr The complete chloroplast genome of Tibetan medicine Gentianopsis paludosa
title_full_unstemmed The complete chloroplast genome of Tibetan medicine Gentianopsis paludosa
title_short The complete chloroplast genome of Tibetan medicine Gentianopsis paludosa
title_sort complete chloroplast genome of tibetan medicine gentianopsis paludosa
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748554/
https://www.ncbi.nlm.nih.gov/pubmed/33366712
http://dx.doi.org/10.1080/23802359.2020.1714494
work_keys_str_mv AT yanglucun thecompletechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT xiongfeng thecompletechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT xiaoyuanming thecompletechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT lijingjing thecompletechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT chenchen thecompletechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT lichangbin thecompletechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT wanglingling thecompletechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT zhouguoying thecompletechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT yanglucun completechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT xiongfeng completechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT xiaoyuanming completechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT lijingjing completechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT chenchen completechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT lichangbin completechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT wanglingling completechloroplastgenomeoftibetanmedicinegentianopsispaludosa
AT zhouguoying completechloroplastgenomeoftibetanmedicinegentianopsispaludosa

Ejemplares similares