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Characterization of the complete chloroplast genome of Begonia fimbristipula (Begoniaceae)
Begonia fimbristipula is a plant of perennial flowering plants in the family Begoniaceae. In this article, the complete chloroplast genome of B. fimbristipula was studied and illustrated to add more genetic information. The chloroplast genome is 169,436 bp in length as the circular, which exhibits a...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748561/ https://www.ncbi.nlm.nih.gov/pubmed/33366745 http://dx.doi.org/10.1080/23802359.2020.1715872 |
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author | Huang, Liping Wang, Jinmin |
author_facet | Huang, Liping Wang, Jinmin |
author_sort | Huang, Liping |
collection | PubMed |
description | Begonia fimbristipula is a plant of perennial flowering plants in the family Begoniaceae. In this article, the complete chloroplast genome of B. fimbristipula was studied and illustrated to add more genetic information. The chloroplast genome is 169,436 bp in length as the circular, which exhibits a large single-copy region (LSC) of 77,058 bp, a small single-copy region (SSC) of 18,128 bp, and a pair of inverted repeat regions (IRs) of 37,123 bp in each. The overall nucleotide composition of chloroplast genome is: 31.8% A, 32.6% T, 18.0% C, 17.5% G, and the total GC content 35.5%. A total of 142 genes were annotated that included 91 protein-coding genes (PCGs), 43 transfer RNA (tRNAs), and 8 ribosome RNA (rRNAs). Phylogenetic relationship shows that Begonia fimbristipula is more closely related to Begonia pulchrifolia on genetic relationships using the Maximum-Likelihood (ML) method. |
format | Online Article Text |
id | pubmed-7748561 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77485612020-12-22 Characterization of the complete chloroplast genome of Begonia fimbristipula (Begoniaceae) Huang, Liping Wang, Jinmin Mitochondrial DNA B Resour Mitogenome Announcement Begonia fimbristipula is a plant of perennial flowering plants in the family Begoniaceae. In this article, the complete chloroplast genome of B. fimbristipula was studied and illustrated to add more genetic information. The chloroplast genome is 169,436 bp in length as the circular, which exhibits a large single-copy region (LSC) of 77,058 bp, a small single-copy region (SSC) of 18,128 bp, and a pair of inverted repeat regions (IRs) of 37,123 bp in each. The overall nucleotide composition of chloroplast genome is: 31.8% A, 32.6% T, 18.0% C, 17.5% G, and the total GC content 35.5%. A total of 142 genes were annotated that included 91 protein-coding genes (PCGs), 43 transfer RNA (tRNAs), and 8 ribosome RNA (rRNAs). Phylogenetic relationship shows that Begonia fimbristipula is more closely related to Begonia pulchrifolia on genetic relationships using the Maximum-Likelihood (ML) method. Taylor & Francis 2020-01-22 /pmc/articles/PMC7748561/ /pubmed/33366745 http://dx.doi.org/10.1080/23802359.2020.1715872 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Huang, Liping Wang, Jinmin Characterization of the complete chloroplast genome of Begonia fimbristipula (Begoniaceae) |
title | Characterization of the complete chloroplast genome of Begonia fimbristipula (Begoniaceae) |
title_full | Characterization of the complete chloroplast genome of Begonia fimbristipula (Begoniaceae) |
title_fullStr | Characterization of the complete chloroplast genome of Begonia fimbristipula (Begoniaceae) |
title_full_unstemmed | Characterization of the complete chloroplast genome of Begonia fimbristipula (Begoniaceae) |
title_short | Characterization of the complete chloroplast genome of Begonia fimbristipula (Begoniaceae) |
title_sort | characterization of the complete chloroplast genome of begonia fimbristipula (begoniaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748561/ https://www.ncbi.nlm.nih.gov/pubmed/33366745 http://dx.doi.org/10.1080/23802359.2020.1715872 |
work_keys_str_mv | AT huangliping characterizationofthecompletechloroplastgenomeofbegoniafimbristipulabegoniaceae AT wangjinmin characterizationofthecompletechloroplastgenomeofbegoniafimbristipulabegoniaceae |