Complete chloroplast genome sequence of Bambusa pervariabilis (Bambusodae)

Bambusa pervariabilis is mostly produced in south China; usually cultivated on the banks of the rivers and near villages. We determined the complete chloroplast (cp) genome sequence of B. pervariabilis using Illumina sequencing data. The complete cp sequence is 139,393 bp, include large single-copy...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Yang-Yang, Fan, Li-Li, Su, Jian-Lin, Xu, Lin-Zheng, Li, Min, Chen, Ling-Yan, Rong, Jun-Dong, Zheng, Yu-Shan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748570/
https://www.ncbi.nlm.nih.gov/pubmed/33366752
http://dx.doi.org/10.1080/23802359.2019.1710298
_version_ 1783625142215114752
author Zhang, Yang-Yang
Fan, Li-Li
Su, Jian-Lin
Xu, Lin-Zheng
Li, Min
Chen, Ling-Yan
Rong, Jun-Dong
Zheng, Yu-Shan
author_facet Zhang, Yang-Yang
Fan, Li-Li
Su, Jian-Lin
Xu, Lin-Zheng
Li, Min
Chen, Ling-Yan
Rong, Jun-Dong
Zheng, Yu-Shan
author_sort Zhang, Yang-Yang
collection PubMed
description Bambusa pervariabilis is mostly produced in south China; usually cultivated on the banks of the rivers and near villages. We determined the complete chloroplast (cp) genome sequence of B. pervariabilis using Illumina sequencing data. The complete cp sequence is 139,393 bp, include large single-copy (LSC) region of 82,969 bp, small single-copy (SSC) region of 12,874 bp, a pair of invert repeats (IR) regions of 21,775 bp. Plastid genome contain 132 genes, 85 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 28 cp genomes indicates that B. pervariabilis is closely related to Bambusa multiplex in Bambusodae.
format Online
Article
Text
id pubmed-7748570
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77485702020-12-22 Complete chloroplast genome sequence of Bambusa pervariabilis (Bambusodae) Zhang, Yang-Yang Fan, Li-Li Su, Jian-Lin Xu, Lin-Zheng Li, Min Chen, Ling-Yan Rong, Jun-Dong Zheng, Yu-Shan Mitochondrial DNA B Resour Mitogenome Announcement Bambusa pervariabilis is mostly produced in south China; usually cultivated on the banks of the rivers and near villages. We determined the complete chloroplast (cp) genome sequence of B. pervariabilis using Illumina sequencing data. The complete cp sequence is 139,393 bp, include large single-copy (LSC) region of 82,969 bp, small single-copy (SSC) region of 12,874 bp, a pair of invert repeats (IR) regions of 21,775 bp. Plastid genome contain 132 genes, 85 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 28 cp genomes indicates that B. pervariabilis is closely related to Bambusa multiplex in Bambusodae. Taylor & Francis 2020-01-24 /pmc/articles/PMC7748570/ /pubmed/33366752 http://dx.doi.org/10.1080/23802359.2019.1710298 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Yang-Yang
Fan, Li-Li
Su, Jian-Lin
Xu, Lin-Zheng
Li, Min
Chen, Ling-Yan
Rong, Jun-Dong
Zheng, Yu-Shan
Complete chloroplast genome sequence of Bambusa pervariabilis (Bambusodae)
title Complete chloroplast genome sequence of Bambusa pervariabilis (Bambusodae)
title_full Complete chloroplast genome sequence of Bambusa pervariabilis (Bambusodae)
title_fullStr Complete chloroplast genome sequence of Bambusa pervariabilis (Bambusodae)
title_full_unstemmed Complete chloroplast genome sequence of Bambusa pervariabilis (Bambusodae)
title_short Complete chloroplast genome sequence of Bambusa pervariabilis (Bambusodae)
title_sort complete chloroplast genome sequence of bambusa pervariabilis (bambusodae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748570/
https://www.ncbi.nlm.nih.gov/pubmed/33366752
http://dx.doi.org/10.1080/23802359.2019.1710298
work_keys_str_mv AT zhangyangyang completechloroplastgenomesequenceofbambusapervariabilisbambusodae
AT fanlili completechloroplastgenomesequenceofbambusapervariabilisbambusodae
AT sujianlin completechloroplastgenomesequenceofbambusapervariabilisbambusodae
AT xulinzheng completechloroplastgenomesequenceofbambusapervariabilisbambusodae
AT limin completechloroplastgenomesequenceofbambusapervariabilisbambusodae
AT chenlingyan completechloroplastgenomesequenceofbambusapervariabilisbambusodae
AT rongjundong completechloroplastgenomesequenceofbambusapervariabilisbambusodae
AT zhengyushan completechloroplastgenomesequenceofbambusapervariabilisbambusodae

Ejemplares similares