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The complete chloroplast genome sequence of Magnolia mexicana DC. (Magnoliaceae) from Central America
The chloroplast genome of the Magnolia species from Central America has never been reported. With its local use for food flavoring, medicine, and wood, M. mexicana has been of good economic importance. In the present study, the complete chloroplast genome of M. mexicana was assembled via the genome...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748584/ https://www.ncbi.nlm.nih.gov/pubmed/33366756 http://dx.doi.org/10.1080/23802359.2020.1715854 |
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author | Liu, Guang-Ning Liu, Bin-Bin Wen, Jun Wang, Yu-Bing |
author_facet | Liu, Guang-Ning Liu, Bin-Bin Wen, Jun Wang, Yu-Bing |
author_sort | Liu, Guang-Ning |
collection | PubMed |
description | The chloroplast genome of the Magnolia species from Central America has never been reported. With its local use for food flavoring, medicine, and wood, M. mexicana has been of good economic importance. In the present study, the complete chloroplast genome of M. mexicana was assembled via the genome skimming data. As a typical quadripartite structure, the plastome of M. mexicana with 159,906 bp in length includes two inverted repeats (26,554 bp) separated by a small single copy region (18,761 bp) as well as a large single copy region (88,037 bp). This chloroplast genome consists of 131 different genes, including 86 protein coding genes (CDS), eight rRNA genes, and 37 tRNA genes. The maximum likelihood phylogenetic analysis showed that M. mexicana from Central America was closely related to an evergreen species, M. odoratissima from East Asia. |
format | Online Article Text |
id | pubmed-7748584 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77485842020-12-22 The complete chloroplast genome sequence of Magnolia mexicana DC. (Magnoliaceae) from Central America Liu, Guang-Ning Liu, Bin-Bin Wen, Jun Wang, Yu-Bing Mitochondrial DNA B Resour Mitogenome Announcement The chloroplast genome of the Magnolia species from Central America has never been reported. With its local use for food flavoring, medicine, and wood, M. mexicana has been of good economic importance. In the present study, the complete chloroplast genome of M. mexicana was assembled via the genome skimming data. As a typical quadripartite structure, the plastome of M. mexicana with 159,906 bp in length includes two inverted repeats (26,554 bp) separated by a small single copy region (18,761 bp) as well as a large single copy region (88,037 bp). This chloroplast genome consists of 131 different genes, including 86 protein coding genes (CDS), eight rRNA genes, and 37 tRNA genes. The maximum likelihood phylogenetic analysis showed that M. mexicana from Central America was closely related to an evergreen species, M. odoratissima from East Asia. Taylor & Francis 2020-01-24 /pmc/articles/PMC7748584/ /pubmed/33366756 http://dx.doi.org/10.1080/23802359.2020.1715854 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Liu, Guang-Ning Liu, Bin-Bin Wen, Jun Wang, Yu-Bing The complete chloroplast genome sequence of Magnolia mexicana DC. (Magnoliaceae) from Central America |
title | The complete chloroplast genome sequence of Magnolia mexicana DC. (Magnoliaceae) from Central America |
title_full | The complete chloroplast genome sequence of Magnolia mexicana DC. (Magnoliaceae) from Central America |
title_fullStr | The complete chloroplast genome sequence of Magnolia mexicana DC. (Magnoliaceae) from Central America |
title_full_unstemmed | The complete chloroplast genome sequence of Magnolia mexicana DC. (Magnoliaceae) from Central America |
title_short | The complete chloroplast genome sequence of Magnolia mexicana DC. (Magnoliaceae) from Central America |
title_sort | complete chloroplast genome sequence of magnolia mexicana dc. (magnoliaceae) from central america |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748584/ https://www.ncbi.nlm.nih.gov/pubmed/33366756 http://dx.doi.org/10.1080/23802359.2020.1715854 |
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