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Complete chloroplast genome of Helicia nilagirica Bedd. and its phylogenetic analysis

Helicia nilagirica Bedd. is a medicinal plant. Its fruit is the main raw material from which helicid, a compound that has sedative, hypnotic, analgesic, and other central nervous system inhibitory effects, is extracted. Here, we report and characterize the complete chloroplast genome of H. nilagiric...

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Autores principales: Niu, Ying-Feng, Liu, Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748602/
https://www.ncbi.nlm.nih.gov/pubmed/33366548
http://dx.doi.org/10.1080/23802359.2019.1703587
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author Niu, Ying-Feng
Liu, Jin
author_facet Niu, Ying-Feng
Liu, Jin
author_sort Niu, Ying-Feng
collection PubMed
description Helicia nilagirica Bedd. is a medicinal plant. Its fruit is the main raw material from which helicid, a compound that has sedative, hypnotic, analgesic, and other central nervous system inhibitory effects, is extracted. Here, we report and characterize the complete chloroplast genome of H. nilagirica in this study. The complete chloroplast genome of H. nilagirica contains 157,217 bp and consists of four regions, including a large single-copy region (LSC, 85,516 bp), two inverted repeat regions (IRs, 26,700 bp), and a small single copy (SSC, 18,301 bp) region. A total of 132 genes were obtained by annotation, including 88 protein-coding genes, 36 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Phylogenetic analysis showed that H. nilagirica is closely related to Macadamia integrifolia, suggesting that H. nilagirica may be used as rootstock or gene donor in macadamia breeding. This study lays a foundation for future phylogenetic and evolutionary studies of Proteaceae.
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spelling pubmed-77486022020-12-22 Complete chloroplast genome of Helicia nilagirica Bedd. and its phylogenetic analysis Niu, Ying-Feng Liu, Jin Mitochondrial DNA B Resour Mitogenome Announcement Helicia nilagirica Bedd. is a medicinal plant. Its fruit is the main raw material from which helicid, a compound that has sedative, hypnotic, analgesic, and other central nervous system inhibitory effects, is extracted. Here, we report and characterize the complete chloroplast genome of H. nilagirica in this study. The complete chloroplast genome of H. nilagirica contains 157,217 bp and consists of four regions, including a large single-copy region (LSC, 85,516 bp), two inverted repeat regions (IRs, 26,700 bp), and a small single copy (SSC, 18,301 bp) region. A total of 132 genes were obtained by annotation, including 88 protein-coding genes, 36 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Phylogenetic analysis showed that H. nilagirica is closely related to Macadamia integrifolia, suggesting that H. nilagirica may be used as rootstock or gene donor in macadamia breeding. This study lays a foundation for future phylogenetic and evolutionary studies of Proteaceae. Taylor & Francis 2019-12-18 /pmc/articles/PMC7748602/ /pubmed/33366548 http://dx.doi.org/10.1080/23802359.2019.1703587 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Niu, Ying-Feng
Liu, Jin
Complete chloroplast genome of Helicia nilagirica Bedd. and its phylogenetic analysis
title Complete chloroplast genome of Helicia nilagirica Bedd. and its phylogenetic analysis
title_full Complete chloroplast genome of Helicia nilagirica Bedd. and its phylogenetic analysis
title_fullStr Complete chloroplast genome of Helicia nilagirica Bedd. and its phylogenetic analysis
title_full_unstemmed Complete chloroplast genome of Helicia nilagirica Bedd. and its phylogenetic analysis
title_short Complete chloroplast genome of Helicia nilagirica Bedd. and its phylogenetic analysis
title_sort complete chloroplast genome of helicia nilagirica bedd. and its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748602/
https://www.ncbi.nlm.nih.gov/pubmed/33366548
http://dx.doi.org/10.1080/23802359.2019.1703587
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