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Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae)
Chlorophytum comosum is a perennial ornamental plant in the family Liliaceae, it is also a valuable medicinal plant. To enrich the genetic resources of C. comosum, its chloroplast genome was determined by Illumina sequencing data. The chloroplast genome is a typical quadripartite structure with a si...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748608/ https://www.ncbi.nlm.nih.gov/pubmed/33366867 http://dx.doi.org/10.1080/23802359.2020.1721362 |
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author | Peng, Yu-Jiao Cui, Xue-Yu Tan, Meng-Chao Hu, Lin Ruan, Hong-Yan Shao, Yuan-Yuan Song, En-Liang Tang, Yu-Juan |
author_facet | Peng, Yu-Jiao Cui, Xue-Yu Tan, Meng-Chao Hu, Lin Ruan, Hong-Yan Shao, Yuan-Yuan Song, En-Liang Tang, Yu-Juan |
author_sort | Peng, Yu-Jiao |
collection | PubMed |
description | Chlorophytum comosum is a perennial ornamental plant in the family Liliaceae, it is also a valuable medicinal plant. To enrich the genetic resources of C. comosum, its chloroplast genome was determined by Illumina sequencing data. The chloroplast genome is a typical quadripartite structure with a size of 153,983 bp, of which the LSC region is 83,471 bp, the SSC region is 18,010 bp, and the pair of IR regions is 26,251 bp. The overall GC content is 37%. It contains 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analyses showed that C. comosum is closely related to Chlorophytum rhizopendulum. However, it can be distinguished from other plants. This study enriches the sequence resources of C. comosum and provides important data for the development of molecular identification markers. |
format | Online Article Text |
id | pubmed-7748608 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77486082020-12-22 Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae) Peng, Yu-Jiao Cui, Xue-Yu Tan, Meng-Chao Hu, Lin Ruan, Hong-Yan Shao, Yuan-Yuan Song, En-Liang Tang, Yu-Juan Mitochondrial DNA B Resour Mitogenome Announcement Chlorophytum comosum is a perennial ornamental plant in the family Liliaceae, it is also a valuable medicinal plant. To enrich the genetic resources of C. comosum, its chloroplast genome was determined by Illumina sequencing data. The chloroplast genome is a typical quadripartite structure with a size of 153,983 bp, of which the LSC region is 83,471 bp, the SSC region is 18,010 bp, and the pair of IR regions is 26,251 bp. The overall GC content is 37%. It contains 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analyses showed that C. comosum is closely related to Chlorophytum rhizopendulum. However, it can be distinguished from other plants. This study enriches the sequence resources of C. comosum and provides important data for the development of molecular identification markers. Taylor & Francis 2020-02-03 /pmc/articles/PMC7748608/ /pubmed/33366867 http://dx.doi.org/10.1080/23802359.2020.1721362 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Peng, Yu-Jiao Cui, Xue-Yu Tan, Meng-Chao Hu, Lin Ruan, Hong-Yan Shao, Yuan-Yuan Song, En-Liang Tang, Yu-Juan Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae) |
title | Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae) |
title_full | Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae) |
title_fullStr | Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae) |
title_full_unstemmed | Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae) |
title_short | Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae) |
title_sort | characterization of the complete chloroplast genome of chlorophytum comosum (liliaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748608/ https://www.ncbi.nlm.nih.gov/pubmed/33366867 http://dx.doi.org/10.1080/23802359.2020.1721362 |
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