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Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae)

Chlorophytum comosum is a perennial ornamental plant in the family Liliaceae, it is also a valuable medicinal plant. To enrich the genetic resources of C. comosum, its chloroplast genome was determined by Illumina sequencing data. The chloroplast genome is a typical quadripartite structure with a si...

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Autores principales: Peng, Yu-Jiao, Cui, Xue-Yu, Tan, Meng-Chao, Hu, Lin, Ruan, Hong-Yan, Shao, Yuan-Yuan, Song, En-Liang, Tang, Yu-Juan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748608/
https://www.ncbi.nlm.nih.gov/pubmed/33366867
http://dx.doi.org/10.1080/23802359.2020.1721362
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author Peng, Yu-Jiao
Cui, Xue-Yu
Tan, Meng-Chao
Hu, Lin
Ruan, Hong-Yan
Shao, Yuan-Yuan
Song, En-Liang
Tang, Yu-Juan
author_facet Peng, Yu-Jiao
Cui, Xue-Yu
Tan, Meng-Chao
Hu, Lin
Ruan, Hong-Yan
Shao, Yuan-Yuan
Song, En-Liang
Tang, Yu-Juan
author_sort Peng, Yu-Jiao
collection PubMed
description Chlorophytum comosum is a perennial ornamental plant in the family Liliaceae, it is also a valuable medicinal plant. To enrich the genetic resources of C. comosum, its chloroplast genome was determined by Illumina sequencing data. The chloroplast genome is a typical quadripartite structure with a size of 153,983 bp, of which the LSC region is 83,471 bp, the SSC region is 18,010 bp, and the pair of IR regions is 26,251 bp. The overall GC content is 37%. It contains 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analyses showed that C. comosum is closely related to Chlorophytum rhizopendulum. However, it can be distinguished from other plants. This study enriches the sequence resources of C. comosum and provides important data for the development of molecular identification markers.
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spelling pubmed-77486082020-12-22 Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae) Peng, Yu-Jiao Cui, Xue-Yu Tan, Meng-Chao Hu, Lin Ruan, Hong-Yan Shao, Yuan-Yuan Song, En-Liang Tang, Yu-Juan Mitochondrial DNA B Resour Mitogenome Announcement Chlorophytum comosum is a perennial ornamental plant in the family Liliaceae, it is also a valuable medicinal plant. To enrich the genetic resources of C. comosum, its chloroplast genome was determined by Illumina sequencing data. The chloroplast genome is a typical quadripartite structure with a size of 153,983 bp, of which the LSC region is 83,471 bp, the SSC region is 18,010 bp, and the pair of IR regions is 26,251 bp. The overall GC content is 37%. It contains 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analyses showed that C. comosum is closely related to Chlorophytum rhizopendulum. However, it can be distinguished from other plants. This study enriches the sequence resources of C. comosum and provides important data for the development of molecular identification markers. Taylor & Francis 2020-02-03 /pmc/articles/PMC7748608/ /pubmed/33366867 http://dx.doi.org/10.1080/23802359.2020.1721362 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Peng, Yu-Jiao
Cui, Xue-Yu
Tan, Meng-Chao
Hu, Lin
Ruan, Hong-Yan
Shao, Yuan-Yuan
Song, En-Liang
Tang, Yu-Juan
Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae)
title Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae)
title_full Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae)
title_fullStr Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae)
title_full_unstemmed Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae)
title_short Characterization of the complete chloroplast genome of Chlorophytum comosum (Liliaceae)
title_sort characterization of the complete chloroplast genome of chlorophytum comosum (liliaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748608/
https://www.ncbi.nlm.nih.gov/pubmed/33366867
http://dx.doi.org/10.1080/23802359.2020.1721362
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