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Complete plastome sequence of Elaeagnus glabra (Elaeagnaceae): an Asian endemic plant species

Elaeagnus glabra is an evergreen vine or climbing shrub with 5 m height. It is widespread in southern China. It grows in the sunny forests or forest margins below 1000 m a.s.l. In this paper, we report and describe the complete plastome of E. glabra in order to provide useful genomic data for its sy...

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Autores principales: Zhao, Kun-Kun, Wang, Jian-Hua, Zhu, Zhi-Xin, Shi, Guo-Zheng, Luo, Shui-Xing, Wang, Hua-Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748609/
https://www.ncbi.nlm.nih.gov/pubmed/33366523
http://dx.doi.org/10.1080/23802359.2019.1702483
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author Zhao, Kun-Kun
Wang, Jian-Hua
Zhu, Zhi-Xin
Shi, Guo-Zheng
Luo, Shui-Xing
Wang, Hua-Feng
author_facet Zhao, Kun-Kun
Wang, Jian-Hua
Zhu, Zhi-Xin
Shi, Guo-Zheng
Luo, Shui-Xing
Wang, Hua-Feng
author_sort Zhao, Kun-Kun
collection PubMed
description Elaeagnus glabra is an evergreen vine or climbing shrub with 5 m height. It is widespread in southern China. It grows in the sunny forests or forest margins below 1000 m a.s.l. In this paper, we report and describe the complete plastome of E. glabra in order to provide useful genomic data for its systematic research. The complete plastome of E. glabra is 152,555 bp with a typical quadripartite structure of angiosperms. It contains two Inverted Repeats (IRs) of 25,918 bp, a large single-copy (LSC) of 82,408 bp, and a small single-copy (SSC) region of 18,311 bp. The complete plastome contains 129 genes, including 83 protein-coding genes, 38 tRNA genes, and eight rRNA genes. The overall A/T content in the chloroplast genome of E. glabra is 62.90%. The phylogenetic analysis indicated that E. glabra is close to E. loureirii within Elaeagnaceae. The complete plastome of E. glabra will provide useful resources for the development and utilization of this species and the phylogenetic study of Rosales.
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spelling pubmed-77486092020-12-22 Complete plastome sequence of Elaeagnus glabra (Elaeagnaceae): an Asian endemic plant species Zhao, Kun-Kun Wang, Jian-Hua Zhu, Zhi-Xin Shi, Guo-Zheng Luo, Shui-Xing Wang, Hua-Feng Mitochondrial DNA B Resour Mitogenome Announcement Elaeagnus glabra is an evergreen vine or climbing shrub with 5 m height. It is widespread in southern China. It grows in the sunny forests or forest margins below 1000 m a.s.l. In this paper, we report and describe the complete plastome of E. glabra in order to provide useful genomic data for its systematic research. The complete plastome of E. glabra is 152,555 bp with a typical quadripartite structure of angiosperms. It contains two Inverted Repeats (IRs) of 25,918 bp, a large single-copy (LSC) of 82,408 bp, and a small single-copy (SSC) region of 18,311 bp. The complete plastome contains 129 genes, including 83 protein-coding genes, 38 tRNA genes, and eight rRNA genes. The overall A/T content in the chloroplast genome of E. glabra is 62.90%. The phylogenetic analysis indicated that E. glabra is close to E. loureirii within Elaeagnaceae. The complete plastome of E. glabra will provide useful resources for the development and utilization of this species and the phylogenetic study of Rosales. Taylor & Francis 2019-12-13 /pmc/articles/PMC7748609/ /pubmed/33366523 http://dx.doi.org/10.1080/23802359.2019.1702483 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhao, Kun-Kun
Wang, Jian-Hua
Zhu, Zhi-Xin
Shi, Guo-Zheng
Luo, Shui-Xing
Wang, Hua-Feng
Complete plastome sequence of Elaeagnus glabra (Elaeagnaceae): an Asian endemic plant species
title Complete plastome sequence of Elaeagnus glabra (Elaeagnaceae): an Asian endemic plant species
title_full Complete plastome sequence of Elaeagnus glabra (Elaeagnaceae): an Asian endemic plant species
title_fullStr Complete plastome sequence of Elaeagnus glabra (Elaeagnaceae): an Asian endemic plant species
title_full_unstemmed Complete plastome sequence of Elaeagnus glabra (Elaeagnaceae): an Asian endemic plant species
title_short Complete plastome sequence of Elaeagnus glabra (Elaeagnaceae): an Asian endemic plant species
title_sort complete plastome sequence of elaeagnus glabra (elaeagnaceae): an asian endemic plant species
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748609/
https://www.ncbi.nlm.nih.gov/pubmed/33366523
http://dx.doi.org/10.1080/23802359.2019.1702483
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