Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae)

Hoya is a remarkable genus with high horticultural ornamental value. In this study, we report and characterize the complete plastid genome sequence of Hoya carnosa. The complete chloroplast genome was 176,340 bp in length, which includes a pair of inverted repeat regions (IRs) of 41,381 bp separated...

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Autores principales: Wei, Xue-Fen, Zeng, Si-Jin, Zhang, Guo-Qiang, Tang, Guang-Da, Huang, Jiu-Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748618/
https://www.ncbi.nlm.nih.gov/pubmed/33366630
http://dx.doi.org/10.1080/23802359.2019.1710596
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author Wei, Xue-Fen
Zeng, Si-Jin
Zhang, Guo-Qiang
Tang, Guang-Da
Huang, Jiu-Xiang
author_facet Wei, Xue-Fen
Zeng, Si-Jin
Zhang, Guo-Qiang
Tang, Guang-Da
Huang, Jiu-Xiang
author_sort Wei, Xue-Fen
collection PubMed
description Hoya is a remarkable genus with high horticultural ornamental value. In this study, we report and characterize the complete plastid genome sequence of Hoya carnosa. The complete chloroplast genome was 176,340 bp in length, which includes a pair of inverted repeat regions (IRs) of 41,381 bp separated by a large single copy region (LSC) 91,281 bp and a small single copy region (SSC) 2,297 bp. Interestingly, IRs expanded into SSC, with the result that most of the genes in SSC were duplicated. This chloroplast genome contained 110 genes, including 76 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The complete plastome sequence of H. carnosa will provide some useful information for future phylogenetic study of Hoya and its horticultural application.
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spelling pubmed-77486182020-12-22 Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae) Wei, Xue-Fen Zeng, Si-Jin Zhang, Guo-Qiang Tang, Guang-Da Huang, Jiu-Xiang Mitochondrial DNA B Resour Mitogenome Announcement Hoya is a remarkable genus with high horticultural ornamental value. In this study, we report and characterize the complete plastid genome sequence of Hoya carnosa. The complete chloroplast genome was 176,340 bp in length, which includes a pair of inverted repeat regions (IRs) of 41,381 bp separated by a large single copy region (LSC) 91,281 bp and a small single copy region (SSC) 2,297 bp. Interestingly, IRs expanded into SSC, with the result that most of the genes in SSC were duplicated. This chloroplast genome contained 110 genes, including 76 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The complete plastome sequence of H. carnosa will provide some useful information for future phylogenetic study of Hoya and its horticultural application. Taylor & Francis 2020-01-17 /pmc/articles/PMC7748618/ /pubmed/33366630 http://dx.doi.org/10.1080/23802359.2019.1710596 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wei, Xue-Fen
Zeng, Si-Jin
Zhang, Guo-Qiang
Tang, Guang-Da
Huang, Jiu-Xiang
Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae)
title Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae)
title_full Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae)
title_fullStr Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae)
title_full_unstemmed Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae)
title_short Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae)
title_sort complete plastome sequence of hoya carnosa (l. f.) r. br. (apocynaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748618/
https://www.ncbi.nlm.nih.gov/pubmed/33366630
http://dx.doi.org/10.1080/23802359.2019.1710596
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