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Complete chloroplast genome sequence of Peganum harmala, an important medicinal plant
Peganum harmala is a perennial herbaceous plant belonging to the genus Peganum, Nitrariaceae and is mainly distributed in dry areas in the Mediterranean and many Asia countries. This plant species has high medicinal value and considerable ecological value. This article reports the first chloroplast...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748625/ https://www.ncbi.nlm.nih.gov/pubmed/33366688 http://dx.doi.org/10.1080/23802359.2019.1711230 |
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author | Zha, Xi Zhao, Pengyuan Gao, Fei Zhou, Yijun |
author_facet | Zha, Xi Zhao, Pengyuan Gao, Fei Zhou, Yijun |
author_sort | Zha, Xi |
collection | PubMed |
description | Peganum harmala is a perennial herbaceous plant belonging to the genus Peganum, Nitrariaceae and is mainly distributed in dry areas in the Mediterranean and many Asia countries. This plant species has high medicinal value and considerable ecological value. This article reports the first chloroplast genome of species in Peganum. The size of the P. harmala chloroplast genome is 160,070 bp, including a large single-copy (LSC) region (88,279 bp), a small single-copy (SSC) region (26,468 bp), and two reverse (IR) regions (18,856 bp). The P. harmala chloroplast genome consists of 132 genes, including 83 protein-coding genes, 38 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. The GC content of P. harmala chloroplast genome is 36.44%. Phylogenetic analysis showed that P. harmala and another Nitrariaceaeis species formed a single blade in the phylogenetic tree. |
format | Online Article Text |
id | pubmed-7748625 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77486252020-12-22 Complete chloroplast genome sequence of Peganum harmala, an important medicinal plant Zha, Xi Zhao, Pengyuan Gao, Fei Zhou, Yijun Mitochondrial DNA B Resour Mitogenome Announcement Peganum harmala is a perennial herbaceous plant belonging to the genus Peganum, Nitrariaceae and is mainly distributed in dry areas in the Mediterranean and many Asia countries. This plant species has high medicinal value and considerable ecological value. This article reports the first chloroplast genome of species in Peganum. The size of the P. harmala chloroplast genome is 160,070 bp, including a large single-copy (LSC) region (88,279 bp), a small single-copy (SSC) region (26,468 bp), and two reverse (IR) regions (18,856 bp). The P. harmala chloroplast genome consists of 132 genes, including 83 protein-coding genes, 38 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. The GC content of P. harmala chloroplast genome is 36.44%. Phylogenetic analysis showed that P. harmala and another Nitrariaceaeis species formed a single blade in the phylogenetic tree. Taylor & Francis 2020-01-16 /pmc/articles/PMC7748625/ /pubmed/33366688 http://dx.doi.org/10.1080/23802359.2019.1711230 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zha, Xi Zhao, Pengyuan Gao, Fei Zhou, Yijun Complete chloroplast genome sequence of Peganum harmala, an important medicinal plant |
title | Complete chloroplast genome sequence of Peganum harmala, an important medicinal plant |
title_full | Complete chloroplast genome sequence of Peganum harmala, an important medicinal plant |
title_fullStr | Complete chloroplast genome sequence of Peganum harmala, an important medicinal plant |
title_full_unstemmed | Complete chloroplast genome sequence of Peganum harmala, an important medicinal plant |
title_short | Complete chloroplast genome sequence of Peganum harmala, an important medicinal plant |
title_sort | complete chloroplast genome sequence of peganum harmala, an important medicinal plant |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748625/ https://www.ncbi.nlm.nih.gov/pubmed/33366688 http://dx.doi.org/10.1080/23802359.2019.1711230 |
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