The complete chloroplast genome of Vitis heyneana Roem. et Schult., an economic plant to China

The chloroplast (cp) genome sequence of Vitis heyneana has been characterized from Illumina pair-end sequencing. The complete cp genome was 160,830 bp in length, containing a large single-copy region (LSC) of 89,049 bp and a small single-copy region (SSC) of 19,071 bp, which were separated by a pair...

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Autores principales: Qin, Binbin, Liu, Yujuan, Huang, ZeYun, Liu, Jing, Chen, Qinpei, Jia, Guolun, Xie, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748628/
https://www.ncbi.nlm.nih.gov/pubmed/33366647
http://dx.doi.org/10.1080/23802359.2019.1710289
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author Qin, Binbin
Liu, Yujuan
Huang, ZeYun
Liu, Jing
Chen, Qinpei
Jia, Guolun
Xie, Jun
author_facet Qin, Binbin
Liu, Yujuan
Huang, ZeYun
Liu, Jing
Chen, Qinpei
Jia, Guolun
Xie, Jun
author_sort Qin, Binbin
collection PubMed
description The chloroplast (cp) genome sequence of Vitis heyneana has been characterized from Illumina pair-end sequencing. The complete cp genome was 160,830 bp in length, containing a large single-copy region (LSC) of 89,049 bp and a small single-copy region (SSC) of 19,071 bp, which were separated by a pair of 26,355 bp inverted repeat regions (IRs). The genome contained 131 genes, including 88 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content is 37.4%, while the corresponding values of the LSC, SSC, and IR regions are 35.3, 31.7, and 43.0%, respectively. Further, the phylogenetic analysis suggested that V. heyneana was closely related to Vitis ficifolia.
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spelling pubmed-77486282020-12-22 The complete chloroplast genome of Vitis heyneana Roem. et Schult., an economic plant to China Qin, Binbin Liu, Yujuan Huang, ZeYun Liu, Jing Chen, Qinpei Jia, Guolun Xie, Jun Mitochondrial DNA B Resour Mitogenome Announcement The chloroplast (cp) genome sequence of Vitis heyneana has been characterized from Illumina pair-end sequencing. The complete cp genome was 160,830 bp in length, containing a large single-copy region (LSC) of 89,049 bp and a small single-copy region (SSC) of 19,071 bp, which were separated by a pair of 26,355 bp inverted repeat regions (IRs). The genome contained 131 genes, including 88 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content is 37.4%, while the corresponding values of the LSC, SSC, and IR regions are 35.3, 31.7, and 43.0%, respectively. Further, the phylogenetic analysis suggested that V. heyneana was closely related to Vitis ficifolia. Taylor & Francis 2020-01-14 /pmc/articles/PMC7748628/ /pubmed/33366647 http://dx.doi.org/10.1080/23802359.2019.1710289 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Qin, Binbin
Liu, Yujuan
Huang, ZeYun
Liu, Jing
Chen, Qinpei
Jia, Guolun
Xie, Jun
The complete chloroplast genome of Vitis heyneana Roem. et Schult., an economic plant to China
title The complete chloroplast genome of Vitis heyneana Roem. et Schult., an economic plant to China
title_full The complete chloroplast genome of Vitis heyneana Roem. et Schult., an economic plant to China
title_fullStr The complete chloroplast genome of Vitis heyneana Roem. et Schult., an economic plant to China
title_full_unstemmed The complete chloroplast genome of Vitis heyneana Roem. et Schult., an economic plant to China
title_short The complete chloroplast genome of Vitis heyneana Roem. et Schult., an economic plant to China
title_sort complete chloroplast genome of vitis heyneana roem. et schult., an economic plant to china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748628/
https://www.ncbi.nlm.nih.gov/pubmed/33366647
http://dx.doi.org/10.1080/23802359.2019.1710289
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