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Complete mitochondrial genome sequence of Pareuchiloglanis kamengensis in the Yarlung Zangbo River, Tibet
Pareuchiloglanis kamengensis belongs to the family of Sisoridae, Pareuchiloglanis. It is distributed in the Yarlung Zangbo River, the Irrawaddy River, the Nujiang River, and the Lancang River in southwestern China. In this study, we first published the complete mitochondrial genome sequence of Pareu...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748630/ https://www.ncbi.nlm.nih.gov/pubmed/33366560 http://dx.doi.org/10.1080/23802359.2019.1703576 |
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author | Ma, Qingzhi Li, Lei Lin, Xiaowan Jin, Hongyu Jin, Xing Ma, Bo |
author_facet | Ma, Qingzhi Li, Lei Lin, Xiaowan Jin, Hongyu Jin, Xing Ma, Bo |
author_sort | Ma, Qingzhi |
collection | PubMed |
description | Pareuchiloglanis kamengensis belongs to the family of Sisoridae, Pareuchiloglanis. It is distributed in the Yarlung Zangbo River, the Irrawaddy River, the Nujiang River, and the Lancang River in southwestern China. In this study, we first published the complete mitochondrial genome sequence of Pareuchiloglanis kamengensis, which was 16,589 bp in length. This genome consists of 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes, and a non-coding A + T-rich region. The PCGs start with a traditional ATG except for COX1 and NAD3, which start with GTG and ATA instead, respectively, and end with stop codon TAA, TAG, TA, or a single T base. All tRNA have the typical clover-leaf structure. The phylogenetic tree of the whole mitogenome sequence is constructed by using neighbor-joining (NJ) method and the phylogenetic relationship among the family Sisoridae is further analyzed. We except to provide the theoretical basis for the further study of the phylogenetic relationship, taxonomic status, and conservation and management of genetic resources of Sisoridae catfishes. |
format | Online Article Text |
id | pubmed-7748630 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77486302020-12-22 Complete mitochondrial genome sequence of Pareuchiloglanis kamengensis in the Yarlung Zangbo River, Tibet Ma, Qingzhi Li, Lei Lin, Xiaowan Jin, Hongyu Jin, Xing Ma, Bo Mitochondrial DNA B Resour Mitogenome Announcement Pareuchiloglanis kamengensis belongs to the family of Sisoridae, Pareuchiloglanis. It is distributed in the Yarlung Zangbo River, the Irrawaddy River, the Nujiang River, and the Lancang River in southwestern China. In this study, we first published the complete mitochondrial genome sequence of Pareuchiloglanis kamengensis, which was 16,589 bp in length. This genome consists of 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes, and a non-coding A + T-rich region. The PCGs start with a traditional ATG except for COX1 and NAD3, which start with GTG and ATA instead, respectively, and end with stop codon TAA, TAG, TA, or a single T base. All tRNA have the typical clover-leaf structure. The phylogenetic tree of the whole mitogenome sequence is constructed by using neighbor-joining (NJ) method and the phylogenetic relationship among the family Sisoridae is further analyzed. We except to provide the theoretical basis for the further study of the phylogenetic relationship, taxonomic status, and conservation and management of genetic resources of Sisoridae catfishes. Taylor & Francis 2020-01-07 /pmc/articles/PMC7748630/ /pubmed/33366560 http://dx.doi.org/10.1080/23802359.2019.1703576 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Ma, Qingzhi Li, Lei Lin, Xiaowan Jin, Hongyu Jin, Xing Ma, Bo Complete mitochondrial genome sequence of Pareuchiloglanis kamengensis in the Yarlung Zangbo River, Tibet |
title | Complete mitochondrial genome sequence of Pareuchiloglanis kamengensis in the Yarlung Zangbo River, Tibet |
title_full | Complete mitochondrial genome sequence of Pareuchiloglanis kamengensis in the Yarlung Zangbo River, Tibet |
title_fullStr | Complete mitochondrial genome sequence of Pareuchiloglanis kamengensis in the Yarlung Zangbo River, Tibet |
title_full_unstemmed | Complete mitochondrial genome sequence of Pareuchiloglanis kamengensis in the Yarlung Zangbo River, Tibet |
title_short | Complete mitochondrial genome sequence of Pareuchiloglanis kamengensis in the Yarlung Zangbo River, Tibet |
title_sort | complete mitochondrial genome sequence of pareuchiloglanis kamengensis in the yarlung zangbo river, tibet |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748630/ https://www.ncbi.nlm.nih.gov/pubmed/33366560 http://dx.doi.org/10.1080/23802359.2019.1703576 |
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