The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb

Epimedium wushanense is a well-known medicinal plant in Berberidaceae in China. In this study, we sequenced the complete chloroplast (cp) genome of E. wushanense. The results showed that the cp genome of E. wushanense was 157,283 bp in length, which is composed of a large single-copy region (LSC, 88...

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Autores principales: Liu, Ting, Liu, Xiang, Luo, Yanjiao, Yao, Yu, Wen, Chunmei, Yang, Qianru, Shen, Guoan, Guo, Baolin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748643/
https://www.ncbi.nlm.nih.gov/pubmed/33366765
http://dx.doi.org/10.1080/23802359.2020.1715877
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author Liu, Ting
Liu, Xiang
Luo, Yanjiao
Yao, Yu
Wen, Chunmei
Yang, Qianru
Shen, Guoan
Guo, Baolin
author_facet Liu, Ting
Liu, Xiang
Luo, Yanjiao
Yao, Yu
Wen, Chunmei
Yang, Qianru
Shen, Guoan
Guo, Baolin
author_sort Liu, Ting
collection PubMed
description Epimedium wushanense is a well-known medicinal plant in Berberidaceae in China. In this study, we sequenced the complete chloroplast (cp) genome of E. wushanense. The results showed that the cp genome of E. wushanense was 157,283 bp in length, which is composed of a large single-copy region (LSC, 88,579 bp) and a small single-copy region (SSC, 17,082 bp) that were separated by a pair of inverted repeat regions (IRa and IRb, 25,811 bp). The chloroplast genome of E. wushanense contains 112 unique genes, of which are 78 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The overall GC content was 38.78%. The phylogenetic tree analysis showed that E. wushanense was closely related to E. pseudowushanense, E. lishihchenii, and E. sagittatum.
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spelling pubmed-77486432020-12-22 The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb Liu, Ting Liu, Xiang Luo, Yanjiao Yao, Yu Wen, Chunmei Yang, Qianru Shen, Guoan Guo, Baolin Mitochondrial DNA B Resour Mitogenome Announcement Epimedium wushanense is a well-known medicinal plant in Berberidaceae in China. In this study, we sequenced the complete chloroplast (cp) genome of E. wushanense. The results showed that the cp genome of E. wushanense was 157,283 bp in length, which is composed of a large single-copy region (LSC, 88,579 bp) and a small single-copy region (SSC, 17,082 bp) that were separated by a pair of inverted repeat regions (IRa and IRb, 25,811 bp). The chloroplast genome of E. wushanense contains 112 unique genes, of which are 78 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The overall GC content was 38.78%. The phylogenetic tree analysis showed that E. wushanense was closely related to E. pseudowushanense, E. lishihchenii, and E. sagittatum. Taylor & Francis 2020-01-24 /pmc/articles/PMC7748643/ /pubmed/33366765 http://dx.doi.org/10.1080/23802359.2020.1715877 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Ting
Liu, Xiang
Luo, Yanjiao
Yao, Yu
Wen, Chunmei
Yang, Qianru
Shen, Guoan
Guo, Baolin
The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb
title The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb
title_full The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb
title_fullStr The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb
title_full_unstemmed The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb
title_short The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb
title_sort complete chloroplast genome of epimedium wushanense t. s. ying. (berberidaceae), a traditional chinese medicinal herb
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748643/
https://www.ncbi.nlm.nih.gov/pubmed/33366765
http://dx.doi.org/10.1080/23802359.2020.1715877
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