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The complete chloroplast genome of Styrax dasyanthus Perkins (Styracaceae)
In this work, next-generation sequencing was applied to measure the complete chloroplast genome of S. dasyanthus for the sake of offering valuable genomic information to promote its conservation. The complete chloroplast genome sequence of S. dasyanthus was measured as 157,501 bp in size. It contain...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748644/ https://www.ncbi.nlm.nih.gov/pubmed/33366827 http://dx.doi.org/10.1080/23802359.2020.1721375 |
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author | Xu, Xiaogang Zhang, Yaoqin Tong, Lili Wang, Yabo Xia, Chongli |
author_facet | Xu, Xiaogang Zhang, Yaoqin Tong, Lili Wang, Yabo Xia, Chongli |
author_sort | Xu, Xiaogang |
collection | PubMed |
description | In this work, next-generation sequencing was applied to measure the complete chloroplast genome of S. dasyanthus for the sake of offering valuable genomic information to promote its conservation. The complete chloroplast genome sequence of S. dasyanthus was measured as 157,501 bp in size. It contains the typical structure and gene content of angiosperm plastome, which includes a large single-copy (LSC), a small single-copy (SSC), and 2 inverted repeat (IR) regions of 87,130 bp, 18,277 bp, and 26,047 bp, respectively. The S. dasyanthus chloroplast genome has a total of 130 genes including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Overall, GC contents of the genome were 36.96%. Phylogenetic analysis based on the 29 chloroplast genome measurement demonstrated that S. dasyanthus is most closely related to Styrax grandiflours Griff. |
format | Online Article Text |
id | pubmed-7748644 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77486442020-12-22 The complete chloroplast genome of Styrax dasyanthus Perkins (Styracaceae) Xu, Xiaogang Zhang, Yaoqin Tong, Lili Wang, Yabo Xia, Chongli Mitochondrial DNA B Resour Mitogenome Announcement In this work, next-generation sequencing was applied to measure the complete chloroplast genome of S. dasyanthus for the sake of offering valuable genomic information to promote its conservation. The complete chloroplast genome sequence of S. dasyanthus was measured as 157,501 bp in size. It contains the typical structure and gene content of angiosperm plastome, which includes a large single-copy (LSC), a small single-copy (SSC), and 2 inverted repeat (IR) regions of 87,130 bp, 18,277 bp, and 26,047 bp, respectively. The S. dasyanthus chloroplast genome has a total of 130 genes including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Overall, GC contents of the genome were 36.96%. Phylogenetic analysis based on the 29 chloroplast genome measurement demonstrated that S. dasyanthus is most closely related to Styrax grandiflours Griff. Taylor & Francis 2020-01-31 /pmc/articles/PMC7748644/ /pubmed/33366827 http://dx.doi.org/10.1080/23802359.2020.1721375 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Xu, Xiaogang Zhang, Yaoqin Tong, Lili Wang, Yabo Xia, Chongli The complete chloroplast genome of Styrax dasyanthus Perkins (Styracaceae) |
title | The complete chloroplast genome of Styrax dasyanthus Perkins (Styracaceae) |
title_full | The complete chloroplast genome of Styrax dasyanthus Perkins (Styracaceae) |
title_fullStr | The complete chloroplast genome of Styrax dasyanthus Perkins (Styracaceae) |
title_full_unstemmed | The complete chloroplast genome of Styrax dasyanthus Perkins (Styracaceae) |
title_short | The complete chloroplast genome of Styrax dasyanthus Perkins (Styracaceae) |
title_sort | complete chloroplast genome of styrax dasyanthus perkins (styracaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748644/ https://www.ncbi.nlm.nih.gov/pubmed/33366827 http://dx.doi.org/10.1080/23802359.2020.1721375 |
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