The complete chloroplast genome sequence of Knema furfuracea (Myristicaceae)

Knema furfuracea is a member of Myristicaceae. The K. furfuracea chloroplast genome is found to be 154,527 bp in length and has a base composition of A (29.99%), G (19.31%), C (19.92%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,110 bp) which were separa...

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Autores principales: Yang, Tian, Mao, Chang-Li, Li, Xiao-Qin, Zhang, Feng-Liang, Zhao, Qi, Wu, Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748659/
https://www.ncbi.nlm.nih.gov/pubmed/33366540
http://dx.doi.org/10.1080/23802359.2019.1703570
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author Yang, Tian
Mao, Chang-Li
Li, Xiao-Qin
Zhang, Feng-Liang
Zhao, Qi
Wu, Yu
author_facet Yang, Tian
Mao, Chang-Li
Li, Xiao-Qin
Zhang, Feng-Liang
Zhao, Qi
Wu, Yu
author_sort Yang, Tian
collection PubMed
description Knema furfuracea is a member of Myristicaceae. The K. furfuracea chloroplast genome is found to be 154,527 bp in length and has a base composition of A (29.99%), G (19.31%), C (19.92%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,110 bp) which were separated by a large single copy (LSC) region (86,188 bp) and a small single copy (SSC) region (20,229 bp). The chloroplast genome has 87 protein-coding genes, 27 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. furfuracea was aligned together with two species of Myristicaceae and five basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. furfuracea.
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spelling pubmed-77486592020-12-22 The complete chloroplast genome sequence of Knema furfuracea (Myristicaceae) Yang, Tian Mao, Chang-Li Li, Xiao-Qin Zhang, Feng-Liang Zhao, Qi Wu, Yu Mitochondrial DNA B Resour Mitogenome Announcement Knema furfuracea is a member of Myristicaceae. The K. furfuracea chloroplast genome is found to be 154,527 bp in length and has a base composition of A (29.99%), G (19.31%), C (19.92%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,110 bp) which were separated by a large single copy (LSC) region (86,188 bp) and a small single copy (SSC) region (20,229 bp). The chloroplast genome has 87 protein-coding genes, 27 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. furfuracea was aligned together with two species of Myristicaceae and five basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. furfuracea. Taylor & Francis 2019-12-18 /pmc/articles/PMC7748659/ /pubmed/33366540 http://dx.doi.org/10.1080/23802359.2019.1703570 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Tian
Mao, Chang-Li
Li, Xiao-Qin
Zhang, Feng-Liang
Zhao, Qi
Wu, Yu
The complete chloroplast genome sequence of Knema furfuracea (Myristicaceae)
title The complete chloroplast genome sequence of Knema furfuracea (Myristicaceae)
title_full The complete chloroplast genome sequence of Knema furfuracea (Myristicaceae)
title_fullStr The complete chloroplast genome sequence of Knema furfuracea (Myristicaceae)
title_full_unstemmed The complete chloroplast genome sequence of Knema furfuracea (Myristicaceae)
title_short The complete chloroplast genome sequence of Knema furfuracea (Myristicaceae)
title_sort complete chloroplast genome sequence of knema furfuracea (myristicaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748659/
https://www.ncbi.nlm.nih.gov/pubmed/33366540
http://dx.doi.org/10.1080/23802359.2019.1703570
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