The complete chloroplast genome sequence of a rambler rose, Rosa wichuraiana (Rosaceae)

The rambler Rosa wichuraiana Crép. is an important founder species during modern rose domestication. However, the chloroplast genome (plastome) of this wild species remains unavailable. Here, we assembled the complete chloroplast genomes for two genotypes of R. wichuraiana. Both plastomes were typic...

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Detalles Bibliográficos
Autores principales: Cui, Wei-Hua, Zhong, Mi-Cai, Du, Xin-Yu, Qu, Xiao-Jian, Jiang, Xiao-Dong, Sun, Yi-Bo, Wang, Dan, Chen, Sui-Yun, Hu, Jin-Yong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748672/
https://www.ncbi.nlm.nih.gov/pubmed/33366509
http://dx.doi.org/10.1080/23802359.2019.1700198
Descripción
Sumario:The rambler Rosa wichuraiana Crép. is an important founder species during modern rose domestication. However, the chloroplast genome (plastome) of this wild species remains unavailable. Here, we assembled the complete chloroplast genomes for two genotypes of R. wichuraiana. Both plastomes were typical quadripartite circular with 156,500/156,504 bp in length, comprising a large single-copy (LSC) region of 85,651/85,660 bp and a small single-copy (SSC) region of 18,751/18,744 bp, separated by two inverted repeat (IR) regions of 26,049/26,050 bp, respectively. Both plastomes encoded 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic reconstruction with several rose plastomes revealed that both genotypes were sisters to a clade including Rosa luciae, Rosa multiflora, and Rosa maximowicziana.

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