The complete chloroplast genome sequence of a rambler rose, Rosa wichuraiana (Rosaceae)

The rambler Rosa wichuraiana Crép. is an important founder species during modern rose domestication. However, the chloroplast genome (plastome) of this wild species remains unavailable. Here, we assembled the complete chloroplast genomes for two genotypes of R. wichuraiana. Both plastomes were typic...

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Autores principales: Cui, Wei-Hua, Zhong, Mi-Cai, Du, Xin-Yu, Qu, Xiao-Jian, Jiang, Xiao-Dong, Sun, Yi-Bo, Wang, Dan, Chen, Sui-Yun, Hu, Jin-Yong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748672/
https://www.ncbi.nlm.nih.gov/pubmed/33366509
http://dx.doi.org/10.1080/23802359.2019.1700198
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author Cui, Wei-Hua
Zhong, Mi-Cai
Du, Xin-Yu
Qu, Xiao-Jian
Jiang, Xiao-Dong
Sun, Yi-Bo
Wang, Dan
Chen, Sui-Yun
Hu, Jin-Yong
author_facet Cui, Wei-Hua
Zhong, Mi-Cai
Du, Xin-Yu
Qu, Xiao-Jian
Jiang, Xiao-Dong
Sun, Yi-Bo
Wang, Dan
Chen, Sui-Yun
Hu, Jin-Yong
author_sort Cui, Wei-Hua
collection PubMed
description The rambler Rosa wichuraiana Crép. is an important founder species during modern rose domestication. However, the chloroplast genome (plastome) of this wild species remains unavailable. Here, we assembled the complete chloroplast genomes for two genotypes of R. wichuraiana. Both plastomes were typical quadripartite circular with 156,500/156,504 bp in length, comprising a large single-copy (LSC) region of 85,651/85,660 bp and a small single-copy (SSC) region of 18,751/18,744 bp, separated by two inverted repeat (IR) regions of 26,049/26,050 bp, respectively. Both plastomes encoded 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic reconstruction with several rose plastomes revealed that both genotypes were sisters to a clade including Rosa luciae, Rosa multiflora, and Rosa maximowicziana.
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spelling pubmed-77486722020-12-22 The complete chloroplast genome sequence of a rambler rose, Rosa wichuraiana (Rosaceae) Cui, Wei-Hua Zhong, Mi-Cai Du, Xin-Yu Qu, Xiao-Jian Jiang, Xiao-Dong Sun, Yi-Bo Wang, Dan Chen, Sui-Yun Hu, Jin-Yong Mitochondrial DNA B Resour Mitogenome Announcement The rambler Rosa wichuraiana Crép. is an important founder species during modern rose domestication. However, the chloroplast genome (plastome) of this wild species remains unavailable. Here, we assembled the complete chloroplast genomes for two genotypes of R. wichuraiana. Both plastomes were typical quadripartite circular with 156,500/156,504 bp in length, comprising a large single-copy (LSC) region of 85,651/85,660 bp and a small single-copy (SSC) region of 18,751/18,744 bp, separated by two inverted repeat (IR) regions of 26,049/26,050 bp, respectively. Both plastomes encoded 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic reconstruction with several rose plastomes revealed that both genotypes were sisters to a clade including Rosa luciae, Rosa multiflora, and Rosa maximowicziana. Taylor & Francis 2019-12-12 /pmc/articles/PMC7748672/ /pubmed/33366509 http://dx.doi.org/10.1080/23802359.2019.1700198 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Cui, Wei-Hua
Zhong, Mi-Cai
Du, Xin-Yu
Qu, Xiao-Jian
Jiang, Xiao-Dong
Sun, Yi-Bo
Wang, Dan
Chen, Sui-Yun
Hu, Jin-Yong
The complete chloroplast genome sequence of a rambler rose, Rosa wichuraiana (Rosaceae)
title The complete chloroplast genome sequence of a rambler rose, Rosa wichuraiana (Rosaceae)
title_full The complete chloroplast genome sequence of a rambler rose, Rosa wichuraiana (Rosaceae)
title_fullStr The complete chloroplast genome sequence of a rambler rose, Rosa wichuraiana (Rosaceae)
title_full_unstemmed The complete chloroplast genome sequence of a rambler rose, Rosa wichuraiana (Rosaceae)
title_short The complete chloroplast genome sequence of a rambler rose, Rosa wichuraiana (Rosaceae)
title_sort complete chloroplast genome sequence of a rambler rose, rosa wichuraiana (rosaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748672/
https://www.ncbi.nlm.nih.gov/pubmed/33366509
http://dx.doi.org/10.1080/23802359.2019.1700198
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