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The complete chloroplast genome sequence of Populus koreana (Salicaceae)

The complete chloroplast genome sequence of Populus koreana was characterized using Illumina pair-end sequencing. The chloroplast genome of P. koreana was 156,868 bp in length, containing a large single-copy region (LSC) of 84,976 bp, a small single-copy region (SSC) of 16,606 bp, and two inverted r...

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Detalles Bibliográficos
Autores principales: Ang, Li, Zhe, Hou
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748676/
https://www.ncbi.nlm.nih.gov/pubmed/33366754
http://dx.doi.org/10.1080/23802359.2020.1715291
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author Ang, Li
Zhe, Hou
author_facet Ang, Li
Zhe, Hou
author_sort Ang, Li
collection PubMed
description The complete chloroplast genome sequence of Populus koreana was characterized using Illumina pair-end sequencing. The chloroplast genome of P. koreana was 156,868 bp in length, containing a large single-copy region (LSC) of 84,976 bp, a small single-copy region (SSC) of 16,606 bp, and two inverted repeat (IR) regions of 27,643 bp. The overall GC content is 30.70%, whereas the corresponding values of the LSC, SSC, and IR regions are 64.6%, 69.2%, and 60.1%, respectively. The genome contains 131 complete genes, including 86 protein-coding genes (62 protein-coding gene species), 37 tRNA genes (29 tRNA species), and eight rRNA genes (four rRNA species). The neighbour-joining phylogenetic analysis showed that P. koreana and Populus fremontii clustered together as sisters to other Populus species.
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spelling pubmed-77486762020-12-22 The complete chloroplast genome sequence of Populus koreana (Salicaceae) Ang, Li Zhe, Hou Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Populus koreana was characterized using Illumina pair-end sequencing. The chloroplast genome of P. koreana was 156,868 bp in length, containing a large single-copy region (LSC) of 84,976 bp, a small single-copy region (SSC) of 16,606 bp, and two inverted repeat (IR) regions of 27,643 bp. The overall GC content is 30.70%, whereas the corresponding values of the LSC, SSC, and IR regions are 64.6%, 69.2%, and 60.1%, respectively. The genome contains 131 complete genes, including 86 protein-coding genes (62 protein-coding gene species), 37 tRNA genes (29 tRNA species), and eight rRNA genes (four rRNA species). The neighbour-joining phylogenetic analysis showed that P. koreana and Populus fremontii clustered together as sisters to other Populus species. Taylor & Francis 2020-01-24 /pmc/articles/PMC7748676/ /pubmed/33366754 http://dx.doi.org/10.1080/23802359.2020.1715291 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ang, Li
Zhe, Hou
The complete chloroplast genome sequence of Populus koreana (Salicaceae)
title The complete chloroplast genome sequence of Populus koreana (Salicaceae)
title_full The complete chloroplast genome sequence of Populus koreana (Salicaceae)
title_fullStr The complete chloroplast genome sequence of Populus koreana (Salicaceae)
title_full_unstemmed The complete chloroplast genome sequence of Populus koreana (Salicaceae)
title_short The complete chloroplast genome sequence of Populus koreana (Salicaceae)
title_sort complete chloroplast genome sequence of populus koreana (salicaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748676/
https://www.ncbi.nlm.nih.gov/pubmed/33366754
http://dx.doi.org/10.1080/23802359.2020.1715291
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