Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis

Trichagalma acutissimae (Monzen) (Hymenoptera: Cynipidae) is a major pest of Quercus variabilis Blume in the Taihang Mountains in China. In this study, we sequenced and analyzed the mitochondrial genome (mitogenome) of T. acutissimae. This mitogenome was 16,078 bp long and encoded 13 protein-coding...

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Autores principales: Xue, Shuang, Zhang, Yuanchen, Gao, Shanshan, Lu, Shaohui, Wang, Jingshun, Zhang, Kunpeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748680/
https://www.ncbi.nlm.nih.gov/pubmed/33366880
http://dx.doi.org/10.1080/23802359.2020.1721366
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author Xue, Shuang
Zhang, Yuanchen
Gao, Shanshan
Lu, Shaohui
Wang, Jingshun
Zhang, Kunpeng
author_facet Xue, Shuang
Zhang, Yuanchen
Gao, Shanshan
Lu, Shaohui
Wang, Jingshun
Zhang, Kunpeng
author_sort Xue, Shuang
collection PubMed
description Trichagalma acutissimae (Monzen) (Hymenoptera: Cynipidae) is a major pest of Quercus variabilis Blume in the Taihang Mountains in China. In this study, we sequenced and analyzed the mitochondrial genome (mitogenome) of T. acutissimae. This mitogenome was 16,078 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA unit genes (rRNAs). The whole mitogenome exhibited heavy AT nucleotide bias (86.2%). Except for nad4L that started with TTG, all other PCGs started with the standard ATN codon. All 13 PCGs terminate with the stop codon TAA. Phylogenetic analysis showed that T. acutissimae got together with Synergus sp. with high support value, indicating the close relationship of these two genus. All five Cynipoidea species constituted a major clade and formed a sister group to Proctotrupoidea and Chalcidoidea.
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spelling pubmed-77486802020-12-22 Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis Xue, Shuang Zhang, Yuanchen Gao, Shanshan Lu, Shaohui Wang, Jingshun Zhang, Kunpeng Mitochondrial DNA B Resour Mitogenome Announcement Trichagalma acutissimae (Monzen) (Hymenoptera: Cynipidae) is a major pest of Quercus variabilis Blume in the Taihang Mountains in China. In this study, we sequenced and analyzed the mitochondrial genome (mitogenome) of T. acutissimae. This mitogenome was 16,078 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA unit genes (rRNAs). The whole mitogenome exhibited heavy AT nucleotide bias (86.2%). Except for nad4L that started with TTG, all other PCGs started with the standard ATN codon. All 13 PCGs terminate with the stop codon TAA. Phylogenetic analysis showed that T. acutissimae got together with Synergus sp. with high support value, indicating the close relationship of these two genus. All five Cynipoidea species constituted a major clade and formed a sister group to Proctotrupoidea and Chalcidoidea. Taylor & Francis 2020-02-07 /pmc/articles/PMC7748680/ /pubmed/33366880 http://dx.doi.org/10.1080/23802359.2020.1721366 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xue, Shuang
Zhang, Yuanchen
Gao, Shanshan
Lu, Shaohui
Wang, Jingshun
Zhang, Kunpeng
Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis
title Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis
title_full Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis
title_fullStr Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis
title_full_unstemmed Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis
title_short Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis
title_sort mitochondrial genome of trichagalma acutissimae (hymenoptera: cynipoidea: cynipidae) and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748680/
https://www.ncbi.nlm.nih.gov/pubmed/33366880
http://dx.doi.org/10.1080/23802359.2020.1721366
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