Cargando…
Complete mitochondrial genome of the euryhaline monogonont rotifer Brachionus paranguensis (Rotifera, Brachionidae)
The two complete mitochondrial genomes were sequenced from the euryhaline monogonont rotifer Brachionus paranguensis. The mitochondrial genome sequences were 11,603 bp and 12,901 bp in size, and the gene order of 12 protein-coding genes (PCGs) were identical to those of the marine rotifer Brachionus...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748681/ https://www.ncbi.nlm.nih.gov/pubmed/33366621 http://dx.doi.org/10.1080/23802359.2019.1704655 |
_version_ | 1783625167848603648 |
---|---|
author | Choi, Beom-Soon Kim, Duck-Hyun Lee, Jin-Sol Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong |
author_facet | Choi, Beom-Soon Kim, Duck-Hyun Lee, Jin-Sol Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong |
author_sort | Choi, Beom-Soon |
collection | PubMed |
description | The two complete mitochondrial genomes were sequenced from the euryhaline monogonont rotifer Brachionus paranguensis. The mitochondrial genome sequences were 11,603 bp and 12,901 bp in size, and the gene order of 12 protein-coding genes (PCGs) were identical to those of the marine rotifer Brachionus plicatilis, but the positions of some tRNAs (e.g. tRNA-Ile, tRNA-Leu[TTA], tRNA-Phe, and tRNA-Leu[CTC]) of mitochondrial DNA I were different between B. paranguensis and B. plicatilis mitochondrial genomes. Of 12 PCGs, four genes (ND1, ATPase 6, ND5, and ND3) had incomplete stop codons. Furthermore, the start codon of ND4, ND5, and CO3 genes was ATT, while the start codon of other PCGs was ATG. The base composition of 12 PCGs in B. paranguensis mitochondrial genomes was 26.6% for A, 43.0% for T, 17.65% for C, and 12.75% for G, respectively. |
format | Online Article Text |
id | pubmed-7748681 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77486812020-12-22 Complete mitochondrial genome of the euryhaline monogonont rotifer Brachionus paranguensis (Rotifera, Brachionidae) Choi, Beom-Soon Kim, Duck-Hyun Lee, Jin-Sol Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong Mitochondrial DNA B Resour Mitogenome Announcement The two complete mitochondrial genomes were sequenced from the euryhaline monogonont rotifer Brachionus paranguensis. The mitochondrial genome sequences were 11,603 bp and 12,901 bp in size, and the gene order of 12 protein-coding genes (PCGs) were identical to those of the marine rotifer Brachionus plicatilis, but the positions of some tRNAs (e.g. tRNA-Ile, tRNA-Leu[TTA], tRNA-Phe, and tRNA-Leu[CTC]) of mitochondrial DNA I were different between B. paranguensis and B. plicatilis mitochondrial genomes. Of 12 PCGs, four genes (ND1, ATPase 6, ND5, and ND3) had incomplete stop codons. Furthermore, the start codon of ND4, ND5, and CO3 genes was ATT, while the start codon of other PCGs was ATG. The base composition of 12 PCGs in B. paranguensis mitochondrial genomes was 26.6% for A, 43.0% for T, 17.65% for C, and 12.75% for G, respectively. Taylor & Francis 2020-01-10 /pmc/articles/PMC7748681/ /pubmed/33366621 http://dx.doi.org/10.1080/23802359.2019.1704655 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Choi, Beom-Soon Kim, Duck-Hyun Lee, Jin-Sol Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong Complete mitochondrial genome of the euryhaline monogonont rotifer Brachionus paranguensis (Rotifera, Brachionidae) |
title | Complete mitochondrial genome of the euryhaline monogonont rotifer Brachionus paranguensis (Rotifera, Brachionidae) |
title_full | Complete mitochondrial genome of the euryhaline monogonont rotifer Brachionus paranguensis (Rotifera, Brachionidae) |
title_fullStr | Complete mitochondrial genome of the euryhaline monogonont rotifer Brachionus paranguensis (Rotifera, Brachionidae) |
title_full_unstemmed | Complete mitochondrial genome of the euryhaline monogonont rotifer Brachionus paranguensis (Rotifera, Brachionidae) |
title_short | Complete mitochondrial genome of the euryhaline monogonont rotifer Brachionus paranguensis (Rotifera, Brachionidae) |
title_sort | complete mitochondrial genome of the euryhaline monogonont rotifer brachionus paranguensis (rotifera, brachionidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748681/ https://www.ncbi.nlm.nih.gov/pubmed/33366621 http://dx.doi.org/10.1080/23802359.2019.1704655 |
work_keys_str_mv | AT choibeomsoon completemitochondrialgenomeoftheeuryhalinemonogonontrotiferbrachionusparanguensisrotiferabrachionidae AT kimduckhyun completemitochondrialgenomeoftheeuryhalinemonogonontrotiferbrachionusparanguensisrotiferabrachionidae AT leejinsol completemitochondrialgenomeoftheeuryhalinemonogonontrotiferbrachionusparanguensisrotiferabrachionidae AT kimheejin completemitochondrialgenomeoftheeuryhalinemonogonontrotiferbrachionusparanguensisrotiferabrachionidae AT hagiwaraatsushi completemitochondrialgenomeoftheeuryhalinemonogonontrotiferbrachionusparanguensisrotiferabrachionidae AT leejaeseong completemitochondrialgenomeoftheeuryhalinemonogonontrotiferbrachionusparanguensisrotiferabrachionidae |