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Characterization of the complete chloroplast genome of Linnaea borealis, a rare, clonal self-incompatible plant
Linnaea borealis L. is a creeping shrub which grows about 5–10 cm high and is a rare clonal plant. Linnaea is a monotypic genus. Here, we release and detail the complete chloroplast genome sequences of L. borealis, whose size is 161,576 bp, containing a large single copy region (LSC) of 85,609 bp an...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748684/ https://www.ncbi.nlm.nih.gov/pubmed/33366486 http://dx.doi.org/10.1080/23802359.2019.1698995 |
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author | Liu, Hairui Xia, Mingze Xiao, Qingmeng Fang, Jie Wang, Anqi Chen, Shilong Zhang, Dejun |
author_facet | Liu, Hairui Xia, Mingze Xiao, Qingmeng Fang, Jie Wang, Anqi Chen, Shilong Zhang, Dejun |
author_sort | Liu, Hairui |
collection | PubMed |
description | Linnaea borealis L. is a creeping shrub which grows about 5–10 cm high and is a rare clonal plant. Linnaea is a monotypic genus. Here, we release and detail the complete chloroplast genome sequences of L. borealis, whose size is 161,576 bp, containing a large single copy region (LSC) of 85,609 bp and a single copy region (SSC) of 46,694 bp which typically separates by a pair of inverted repeats (IRs) of 29,210 bp. The amount of the overall genes is 136, which includes 37 tRNA genes, eight rRNA genes, and 91 protein-coding genes. The content of the G/C in whole plastome is 61.74% while the G/C content of the LSC, SSC, and IR region are 36.58%, 38.86%, and 42.25%, respectively. The complete cp genome sequences of L. borealis will be a useful resource to the phylogenetics study in family Caprifoliaceae. |
format | Online Article Text |
id | pubmed-7748684 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77486842020-12-22 Characterization of the complete chloroplast genome of Linnaea borealis, a rare, clonal self-incompatible plant Liu, Hairui Xia, Mingze Xiao, Qingmeng Fang, Jie Wang, Anqi Chen, Shilong Zhang, Dejun Mitochondrial DNA B Resour Mitogenome Announcement Linnaea borealis L. is a creeping shrub which grows about 5–10 cm high and is a rare clonal plant. Linnaea is a monotypic genus. Here, we release and detail the complete chloroplast genome sequences of L. borealis, whose size is 161,576 bp, containing a large single copy region (LSC) of 85,609 bp and a single copy region (SSC) of 46,694 bp which typically separates by a pair of inverted repeats (IRs) of 29,210 bp. The amount of the overall genes is 136, which includes 37 tRNA genes, eight rRNA genes, and 91 protein-coding genes. The content of the G/C in whole plastome is 61.74% while the G/C content of the LSC, SSC, and IR region are 36.58%, 38.86%, and 42.25%, respectively. The complete cp genome sequences of L. borealis will be a useful resource to the phylogenetics study in family Caprifoliaceae. Taylor & Francis 2019-12-12 /pmc/articles/PMC7748684/ /pubmed/33366486 http://dx.doi.org/10.1080/23802359.2019.1698995 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Liu, Hairui Xia, Mingze Xiao, Qingmeng Fang, Jie Wang, Anqi Chen, Shilong Zhang, Dejun Characterization of the complete chloroplast genome of Linnaea borealis, a rare, clonal self-incompatible plant |
title | Characterization of the complete chloroplast genome of Linnaea borealis, a rare, clonal self-incompatible plant |
title_full | Characterization of the complete chloroplast genome of Linnaea borealis, a rare, clonal self-incompatible plant |
title_fullStr | Characterization of the complete chloroplast genome of Linnaea borealis, a rare, clonal self-incompatible plant |
title_full_unstemmed | Characterization of the complete chloroplast genome of Linnaea borealis, a rare, clonal self-incompatible plant |
title_short | Characterization of the complete chloroplast genome of Linnaea borealis, a rare, clonal self-incompatible plant |
title_sort | characterization of the complete chloroplast genome of linnaea borealis, a rare, clonal self-incompatible plant |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748684/ https://www.ncbi.nlm.nih.gov/pubmed/33366486 http://dx.doi.org/10.1080/23802359.2019.1698995 |
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