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The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis
Liparis ochotensis is a snailfish commonly confused with similar fish species because of unclear morphological characteristics. Moreover, molecular genetic studies have not been conducted for snailfish in Korea. Here, we report the complete mitogenome sequence of L. ochotensis, obtained via long PCR...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748685/ https://www.ncbi.nlm.nih.gov/pubmed/33366678 http://dx.doi.org/10.1080/23802359.2019.1711217 |
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author | Sim, Han-Kyeol Jeon, Ju-Hyung Yu, Jeong-Nam Jin, Hyung-Joo Hong, Yong-Ki Jin, Deuk-Hee |
author_facet | Sim, Han-Kyeol Jeon, Ju-Hyung Yu, Jeong-Nam Jin, Hyung-Joo Hong, Yong-Ki Jin, Deuk-Hee |
author_sort | Sim, Han-Kyeol |
collection | PubMed |
description | Liparis ochotensis is a snailfish commonly confused with similar fish species because of unclear morphological characteristics. Moreover, molecular genetic studies have not been conducted for snailfish in Korea. Here, we report the complete mitogenome sequence of L. ochotensis, obtained via long PCR using universal primers for the fish mitogenome. The L. ochotensis mitogenome is 17,522 bp long, comprising 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and one control region. A neighbour-joining phylogenetic tree based on CO1 sequences depicted a close relationship with Liparis gibbus. The complete mitogenome is a valuable resource to classify and conserve L. ochotensis. |
format | Online Article Text |
id | pubmed-7748685 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77486852020-12-22 The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis Sim, Han-Kyeol Jeon, Ju-Hyung Yu, Jeong-Nam Jin, Hyung-Joo Hong, Yong-Ki Jin, Deuk-Hee Mitochondrial DNA B Resour Mitogenome Announcement Liparis ochotensis is a snailfish commonly confused with similar fish species because of unclear morphological characteristics. Moreover, molecular genetic studies have not been conducted for snailfish in Korea. Here, we report the complete mitogenome sequence of L. ochotensis, obtained via long PCR using universal primers for the fish mitogenome. The L. ochotensis mitogenome is 17,522 bp long, comprising 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and one control region. A neighbour-joining phylogenetic tree based on CO1 sequences depicted a close relationship with Liparis gibbus. The complete mitogenome is a valuable resource to classify and conserve L. ochotensis. Taylor & Francis 2020-01-16 /pmc/articles/PMC7748685/ /pubmed/33366678 http://dx.doi.org/10.1080/23802359.2019.1711217 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Sim, Han-Kyeol Jeon, Ju-Hyung Yu, Jeong-Nam Jin, Hyung-Joo Hong, Yong-Ki Jin, Deuk-Hee The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis |
title | The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis |
title_full | The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis |
title_fullStr | The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis |
title_full_unstemmed | The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis |
title_short | The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis |
title_sort | complete mitochondrial genome of liparis ochotensis and a preliminary phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748685/ https://www.ncbi.nlm.nih.gov/pubmed/33366678 http://dx.doi.org/10.1080/23802359.2019.1711217 |
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