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The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis

Liparis ochotensis is a snailfish commonly confused with similar fish species because of unclear morphological characteristics. Moreover, molecular genetic studies have not been conducted for snailfish in Korea. Here, we report the complete mitogenome sequence of L. ochotensis, obtained via long PCR...

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Autores principales: Sim, Han-Kyeol, Jeon, Ju-Hyung, Yu, Jeong-Nam, Jin, Hyung-Joo, Hong, Yong-Ki, Jin, Deuk-Hee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748685/
https://www.ncbi.nlm.nih.gov/pubmed/33366678
http://dx.doi.org/10.1080/23802359.2019.1711217
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author Sim, Han-Kyeol
Jeon, Ju-Hyung
Yu, Jeong-Nam
Jin, Hyung-Joo
Hong, Yong-Ki
Jin, Deuk-Hee
author_facet Sim, Han-Kyeol
Jeon, Ju-Hyung
Yu, Jeong-Nam
Jin, Hyung-Joo
Hong, Yong-Ki
Jin, Deuk-Hee
author_sort Sim, Han-Kyeol
collection PubMed
description Liparis ochotensis is a snailfish commonly confused with similar fish species because of unclear morphological characteristics. Moreover, molecular genetic studies have not been conducted for snailfish in Korea. Here, we report the complete mitogenome sequence of L. ochotensis, obtained via long PCR using universal primers for the fish mitogenome. The L. ochotensis mitogenome is 17,522 bp long, comprising 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and one control region. A neighbour-joining phylogenetic tree based on CO1 sequences depicted a close relationship with Liparis gibbus. The complete mitogenome is a valuable resource to classify and conserve L. ochotensis.
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spelling pubmed-77486852020-12-22 The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis Sim, Han-Kyeol Jeon, Ju-Hyung Yu, Jeong-Nam Jin, Hyung-Joo Hong, Yong-Ki Jin, Deuk-Hee Mitochondrial DNA B Resour Mitogenome Announcement Liparis ochotensis is a snailfish commonly confused with similar fish species because of unclear morphological characteristics. Moreover, molecular genetic studies have not been conducted for snailfish in Korea. Here, we report the complete mitogenome sequence of L. ochotensis, obtained via long PCR using universal primers for the fish mitogenome. The L. ochotensis mitogenome is 17,522 bp long, comprising 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and one control region. A neighbour-joining phylogenetic tree based on CO1 sequences depicted a close relationship with Liparis gibbus. The complete mitogenome is a valuable resource to classify and conserve L. ochotensis. Taylor & Francis 2020-01-16 /pmc/articles/PMC7748685/ /pubmed/33366678 http://dx.doi.org/10.1080/23802359.2019.1711217 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Sim, Han-Kyeol
Jeon, Ju-Hyung
Yu, Jeong-Nam
Jin, Hyung-Joo
Hong, Yong-Ki
Jin, Deuk-Hee
The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis
title The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis
title_full The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis
title_fullStr The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis
title_full_unstemmed The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis
title_short The complete mitochondrial genome of Liparis ochotensis and a preliminary phylogenetic analysis
title_sort complete mitochondrial genome of liparis ochotensis and a preliminary phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748685/
https://www.ncbi.nlm.nih.gov/pubmed/33366678
http://dx.doi.org/10.1080/23802359.2019.1711217
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