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The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae)

Manglietia yuyuanensis is an important afforestation and excellent broad-leaved tree species in southern China. In this study, we assembled the complete chloroplast genome of M. yuyuanensis based on the Illumina sequences, sequence analysis showed the genome was 160,078 bp in length presenting a typ...

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Detalles Bibliográficos
Autores principales: Wang, Junqing, Li, Peng, Mao, Dongdong, Zhang, Xiaomin, Wang, Huan, Li, Yanyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748696/
https://www.ncbi.nlm.nih.gov/pubmed/33366583
http://dx.doi.org/10.1080/23802359.2019.1703568
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author Wang, Junqing
Li, Peng
Mao, Dongdong
Zhang, Xiaomin
Wang, Huan
Li, Yanyan
author_facet Wang, Junqing
Li, Peng
Mao, Dongdong
Zhang, Xiaomin
Wang, Huan
Li, Yanyan
author_sort Wang, Junqing
collection PubMed
description Manglietia yuyuanensis is an important afforestation and excellent broad-leaved tree species in southern China. In this study, we assembled the complete chloroplast genome of M. yuyuanensis based on the Illumina sequences, sequence analysis showed the genome was 160,078 bp in length presenting a typical quadripartite structure and contains an inverted repeat region (IR, 26,467 b), a small single-copy (SSC) region, and a large single-copy (LSC) region (18,785 and 88,359 bp, respectively). The overall GC content was 39.27%. The sequence contained 128 unique genes, including 81 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The maximum-likelihood (ML) phylogenetic analysis revealed that M. maudiae was closely related to Manglietia insignis. A phylogenetic analysis revealed that M. yuyuanensis is closely related to Manglietia glaucifolia, with the genus Manglietia.
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spelling pubmed-77486962020-12-22 The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae) Wang, Junqing Li, Peng Mao, Dongdong Zhang, Xiaomin Wang, Huan Li, Yanyan Mitochondrial DNA B Resour Mitogenome Announcement Manglietia yuyuanensis is an important afforestation and excellent broad-leaved tree species in southern China. In this study, we assembled the complete chloroplast genome of M. yuyuanensis based on the Illumina sequences, sequence analysis showed the genome was 160,078 bp in length presenting a typical quadripartite structure and contains an inverted repeat region (IR, 26,467 b), a small single-copy (SSC) region, and a large single-copy (LSC) region (18,785 and 88,359 bp, respectively). The overall GC content was 39.27%. The sequence contained 128 unique genes, including 81 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The maximum-likelihood (ML) phylogenetic analysis revealed that M. maudiae was closely related to Manglietia insignis. A phylogenetic analysis revealed that M. yuyuanensis is closely related to Manglietia glaucifolia, with the genus Manglietia. Taylor & Francis 2020-01-08 /pmc/articles/PMC7748696/ /pubmed/33366583 http://dx.doi.org/10.1080/23802359.2019.1703568 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Junqing
Li, Peng
Mao, Dongdong
Zhang, Xiaomin
Wang, Huan
Li, Yanyan
The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae)
title The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae)
title_full The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae)
title_fullStr The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae)
title_full_unstemmed The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae)
title_short The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae)
title_sort complete chloroplast genome sequence of manglietia yuyuanensis (magnoliaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748696/
https://www.ncbi.nlm.nih.gov/pubmed/33366583
http://dx.doi.org/10.1080/23802359.2019.1703568
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