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The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae)
Manglietia yuyuanensis is an important afforestation and excellent broad-leaved tree species in southern China. In this study, we assembled the complete chloroplast genome of M. yuyuanensis based on the Illumina sequences, sequence analysis showed the genome was 160,078 bp in length presenting a typ...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748696/ https://www.ncbi.nlm.nih.gov/pubmed/33366583 http://dx.doi.org/10.1080/23802359.2019.1703568 |
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author | Wang, Junqing Li, Peng Mao, Dongdong Zhang, Xiaomin Wang, Huan Li, Yanyan |
author_facet | Wang, Junqing Li, Peng Mao, Dongdong Zhang, Xiaomin Wang, Huan Li, Yanyan |
author_sort | Wang, Junqing |
collection | PubMed |
description | Manglietia yuyuanensis is an important afforestation and excellent broad-leaved tree species in southern China. In this study, we assembled the complete chloroplast genome of M. yuyuanensis based on the Illumina sequences, sequence analysis showed the genome was 160,078 bp in length presenting a typical quadripartite structure and contains an inverted repeat region (IR, 26,467 b), a small single-copy (SSC) region, and a large single-copy (LSC) region (18,785 and 88,359 bp, respectively). The overall GC content was 39.27%. The sequence contained 128 unique genes, including 81 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The maximum-likelihood (ML) phylogenetic analysis revealed that M. maudiae was closely related to Manglietia insignis. A phylogenetic analysis revealed that M. yuyuanensis is closely related to Manglietia glaucifolia, with the genus Manglietia. |
format | Online Article Text |
id | pubmed-7748696 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77486962020-12-22 The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae) Wang, Junqing Li, Peng Mao, Dongdong Zhang, Xiaomin Wang, Huan Li, Yanyan Mitochondrial DNA B Resour Mitogenome Announcement Manglietia yuyuanensis is an important afforestation and excellent broad-leaved tree species in southern China. In this study, we assembled the complete chloroplast genome of M. yuyuanensis based on the Illumina sequences, sequence analysis showed the genome was 160,078 bp in length presenting a typical quadripartite structure and contains an inverted repeat region (IR, 26,467 b), a small single-copy (SSC) region, and a large single-copy (LSC) region (18,785 and 88,359 bp, respectively). The overall GC content was 39.27%. The sequence contained 128 unique genes, including 81 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The maximum-likelihood (ML) phylogenetic analysis revealed that M. maudiae was closely related to Manglietia insignis. A phylogenetic analysis revealed that M. yuyuanensis is closely related to Manglietia glaucifolia, with the genus Manglietia. Taylor & Francis 2020-01-08 /pmc/articles/PMC7748696/ /pubmed/33366583 http://dx.doi.org/10.1080/23802359.2019.1703568 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Wang, Junqing Li, Peng Mao, Dongdong Zhang, Xiaomin Wang, Huan Li, Yanyan The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae) |
title | The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae) |
title_full | The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae) |
title_fullStr | The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae) |
title_short | The complete chloroplast genome sequence of Manglietia yuyuanensis (Magnoliaceae) |
title_sort | complete chloroplast genome sequence of manglietia yuyuanensis (magnoliaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748696/ https://www.ncbi.nlm.nih.gov/pubmed/33366583 http://dx.doi.org/10.1080/23802359.2019.1703568 |
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