The complete chloroplast genome sequence of Altingia yunnanensis

The first complete chloroplast genome (cpDNA) sequence of Altingia yunnanensis was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,860 bp in length, contains a large single-copy region (LSC) of 89,162 bp and a small single-copy region (SSC) of 19,008 bp, which...

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Detalles Bibliográficos
Autores principales: Qiu, Qiong, Yang, Dejun, Xu, Linhong, Xu, Yumei, Wang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748700/
https://www.ncbi.nlm.nih.gov/pubmed/33366869
http://dx.doi.org/10.1080/23802359.2020.1721369
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author Qiu, Qiong
Yang, Dejun
Xu, Linhong
Xu, Yumei
Wang, Yi
author_facet Qiu, Qiong
Yang, Dejun
Xu, Linhong
Xu, Yumei
Wang, Yi
author_sort Qiu, Qiong
collection PubMed
description The first complete chloroplast genome (cpDNA) sequence of Altingia yunnanensis was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,860 bp in length, contains a large single-copy region (LSC) of 89,162 bp and a small single-copy region (SSC) of 19,008 bp, which were separated by a pair of inverted repeat (IR) regions of 26,325 bp each. The genome contains 130 genes, including 85 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. Further, the phylogenomic analysis showed that A. yunnanensis and Altingia excelsa clustered in a clade in Saxifragales order.
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spelling pubmed-77487002020-12-22 The complete chloroplast genome sequence of Altingia yunnanensis Qiu, Qiong Yang, Dejun Xu, Linhong Xu, Yumei Wang, Yi Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome (cpDNA) sequence of Altingia yunnanensis was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,860 bp in length, contains a large single-copy region (LSC) of 89,162 bp and a small single-copy region (SSC) of 19,008 bp, which were separated by a pair of inverted repeat (IR) regions of 26,325 bp each. The genome contains 130 genes, including 85 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. Further, the phylogenomic analysis showed that A. yunnanensis and Altingia excelsa clustered in a clade in Saxifragales order. Taylor & Francis 2020-02-03 /pmc/articles/PMC7748700/ /pubmed/33366869 http://dx.doi.org/10.1080/23802359.2020.1721369 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Qiu, Qiong
Yang, Dejun
Xu, Linhong
Xu, Yumei
Wang, Yi
The complete chloroplast genome sequence of Altingia yunnanensis
title The complete chloroplast genome sequence of Altingia yunnanensis
title_full The complete chloroplast genome sequence of Altingia yunnanensis
title_fullStr The complete chloroplast genome sequence of Altingia yunnanensis
title_full_unstemmed The complete chloroplast genome sequence of Altingia yunnanensis
title_short The complete chloroplast genome sequence of Altingia yunnanensis
title_sort complete chloroplast genome sequence of altingia yunnanensis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748700/
https://www.ncbi.nlm.nih.gov/pubmed/33366869
http://dx.doi.org/10.1080/23802359.2020.1721369
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