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Characterization of the complete chloroplast genome of Saussurea involuerata (Compositae), an endangered species endemic to China
Saussurea involuerata (S. involuerata), a kind of composite and perennial herbage plant, is a rare and precious alpine medicinal plants with high medicinal value, it can regulate human’s body and has health care function, therefore attracts attention of many scholars. It is currently on the Internat...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748709/ https://www.ncbi.nlm.nih.gov/pubmed/33366625 http://dx.doi.org/10.1080/23802359.2019.1705195 |
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author | Wang, Rui Liu, Jinfeng Liu, Siyan Guan, Shuyan Jiao, Peng |
author_facet | Wang, Rui Liu, Jinfeng Liu, Siyan Guan, Shuyan Jiao, Peng |
author_sort | Wang, Rui |
collection | PubMed |
description | Saussurea involuerata (S. involuerata), a kind of composite and perennial herbage plant, is a rare and precious alpine medicinal plants with high medicinal value, it can regulate human’s body and has health care function, therefore attracts attention of many scholars. It is currently on the International Union for Conservation of Nature (IUCN) red list of threatened species. In this study, we first assembled the complete chloroplast (cp) genome of S. involucrata by Illumina paired-end reads data. The whole genome was 152,490 bp, consisting of a pair of inverted repeats of 69,041 bp, large and small single-copy regions of 69,045bp and 18,638 bp in length, respectively. The cp genome contained 134 genes, including 90 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The overall GC content of the whole genome was 37.7%. A neighbor-joining phylogenetic analysis demonstrated a close relationship between S. involuerata and Arctium lappa. |
format | Online Article Text |
id | pubmed-7748709 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77487092020-12-22 Characterization of the complete chloroplast genome of Saussurea involuerata (Compositae), an endangered species endemic to China Wang, Rui Liu, Jinfeng Liu, Siyan Guan, Shuyan Jiao, Peng Mitochondrial DNA B Resour Mitogenome Announcement Saussurea involuerata (S. involuerata), a kind of composite and perennial herbage plant, is a rare and precious alpine medicinal plants with high medicinal value, it can regulate human’s body and has health care function, therefore attracts attention of many scholars. It is currently on the International Union for Conservation of Nature (IUCN) red list of threatened species. In this study, we first assembled the complete chloroplast (cp) genome of S. involucrata by Illumina paired-end reads data. The whole genome was 152,490 bp, consisting of a pair of inverted repeats of 69,041 bp, large and small single-copy regions of 69,045bp and 18,638 bp in length, respectively. The cp genome contained 134 genes, including 90 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The overall GC content of the whole genome was 37.7%. A neighbor-joining phylogenetic analysis demonstrated a close relationship between S. involuerata and Arctium lappa. Taylor & Francis 2020-01-10 /pmc/articles/PMC7748709/ /pubmed/33366625 http://dx.doi.org/10.1080/23802359.2019.1705195 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Wang, Rui Liu, Jinfeng Liu, Siyan Guan, Shuyan Jiao, Peng Characterization of the complete chloroplast genome of Saussurea involuerata (Compositae), an endangered species endemic to China |
title | Characterization of the complete chloroplast genome of Saussurea involuerata (Compositae), an endangered species endemic to China |
title_full | Characterization of the complete chloroplast genome of Saussurea involuerata (Compositae), an endangered species endemic to China |
title_fullStr | Characterization of the complete chloroplast genome of Saussurea involuerata (Compositae), an endangered species endemic to China |
title_full_unstemmed | Characterization of the complete chloroplast genome of Saussurea involuerata (Compositae), an endangered species endemic to China |
title_short | Characterization of the complete chloroplast genome of Saussurea involuerata (Compositae), an endangered species endemic to China |
title_sort | characterization of the complete chloroplast genome of saussurea involuerata (compositae), an endangered species endemic to china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748709/ https://www.ncbi.nlm.nih.gov/pubmed/33366625 http://dx.doi.org/10.1080/23802359.2019.1705195 |
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