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The complete mitochondrial genome of an edible mushroom, Sparassis crispa

Sparassis crispa, also known as cauliflower mushroom, is a widely used medicinal mushroom in traditional Chinese medicine due to the presence of bioactive substances with pharmacological activity. Here, we report a complete mitochondrial genome sequence of S. crispa consisting of 139,253 bp containi...

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Autores principales: Bashir, Khawaja Muhammad Imran, Rheu, Kyoung Min, Kim, Moo-Sang, Cho, Man-Gi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748716/
https://www.ncbi.nlm.nih.gov/pubmed/33366786
http://dx.doi.org/10.1080/23802359.2020.1715855
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author Bashir, Khawaja Muhammad Imran
Rheu, Kyoung Min
Kim, Moo-Sang
Cho, Man-Gi
author_facet Bashir, Khawaja Muhammad Imran
Rheu, Kyoung Min
Kim, Moo-Sang
Cho, Man-Gi
author_sort Bashir, Khawaja Muhammad Imran
collection PubMed
description Sparassis crispa, also known as cauliflower mushroom, is a widely used medicinal mushroom in traditional Chinese medicine due to the presence of bioactive substances with pharmacological activity. Here, we report a complete mitochondrial genome sequence of S. crispa consisting of 139,253 bp containing 47 genes including 15 protein-coding genes, 27 transfer RNA, and 5 ribosomal RNA genes obtained from 40.406 Mb genome containing 18,917 predicted contigs using raw data of next-generation sequencing having 85.4% Q30. The overall base composition of S. crispa was 26.47% G-C and 73.53% A-T. The phylogenetic tree based on atp6 sequence data showed its close relationship with Sparassis radicata. The complete mitochondrial genome sequence of S. crispa provides an essential and important DNA molecular data for further phylogenetic and evolutionary analysis of S. crispa.
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spelling pubmed-77487162020-12-22 The complete mitochondrial genome of an edible mushroom, Sparassis crispa Bashir, Khawaja Muhammad Imran Rheu, Kyoung Min Kim, Moo-Sang Cho, Man-Gi Mitochondrial DNA B Resour Mitogenome Announcement Sparassis crispa, also known as cauliflower mushroom, is a widely used medicinal mushroom in traditional Chinese medicine due to the presence of bioactive substances with pharmacological activity. Here, we report a complete mitochondrial genome sequence of S. crispa consisting of 139,253 bp containing 47 genes including 15 protein-coding genes, 27 transfer RNA, and 5 ribosomal RNA genes obtained from 40.406 Mb genome containing 18,917 predicted contigs using raw data of next-generation sequencing having 85.4% Q30. The overall base composition of S. crispa was 26.47% G-C and 73.53% A-T. The phylogenetic tree based on atp6 sequence data showed its close relationship with Sparassis radicata. The complete mitochondrial genome sequence of S. crispa provides an essential and important DNA molecular data for further phylogenetic and evolutionary analysis of S. crispa. Taylor & Francis 2020-01-27 /pmc/articles/PMC7748716/ /pubmed/33366786 http://dx.doi.org/10.1080/23802359.2020.1715855 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Bashir, Khawaja Muhammad Imran
Rheu, Kyoung Min
Kim, Moo-Sang
Cho, Man-Gi
The complete mitochondrial genome of an edible mushroom, Sparassis crispa
title The complete mitochondrial genome of an edible mushroom, Sparassis crispa
title_full The complete mitochondrial genome of an edible mushroom, Sparassis crispa
title_fullStr The complete mitochondrial genome of an edible mushroom, Sparassis crispa
title_full_unstemmed The complete mitochondrial genome of an edible mushroom, Sparassis crispa
title_short The complete mitochondrial genome of an edible mushroom, Sparassis crispa
title_sort complete mitochondrial genome of an edible mushroom, sparassis crispa
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748716/
https://www.ncbi.nlm.nih.gov/pubmed/33366786
http://dx.doi.org/10.1080/23802359.2020.1715855
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