Sequencing and characterization of mitochondrial genome of Idaea effusaria (Lepidoptera: Geometridae)

The Idaea effusaria belongs to Geometridae in Lepidoptera. The complete mitogenome of I. effusaria was described in this study, which is typically circular duplex molecules and 16,161 bp in length, containing the standard metazoan set of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RN...

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Autor principal: Xie, Jian-Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748719/
https://www.ncbi.nlm.nih.gov/pubmed/33366846
http://dx.doi.org/10.1080/23802359.2020.1720542
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author Xie, Jian-Lin
author_facet Xie, Jian-Lin
author_sort Xie, Jian-Lin
collection PubMed
description The Idaea effusaria belongs to Geometridae in Lepidoptera. The complete mitogenome of I. effusaria was described in this study, which is typically circular duplex molecules and 16,161 bp in length, containing the standard metazoan set of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and an A + T-rich region. The gene order is same with other lepidopterans. Except for cox1 started with CGA, all other PCGs started with the standard ATN codons. Most of the PCGs terminated with the stop codon TAA, whereas cox2 has the stop codon CAT. The phylogenetic tree showed that Larentiinae is close to Sterrhinae. The species of Ennominae form a monophyly.
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spelling pubmed-77487192020-12-22 Sequencing and characterization of mitochondrial genome of Idaea effusaria (Lepidoptera: Geometridae) Xie, Jian-Lin Mitochondrial DNA B Resour Mitogenome Announcement The Idaea effusaria belongs to Geometridae in Lepidoptera. The complete mitogenome of I. effusaria was described in this study, which is typically circular duplex molecules and 16,161 bp in length, containing the standard metazoan set of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and an A + T-rich region. The gene order is same with other lepidopterans. Except for cox1 started with CGA, all other PCGs started with the standard ATN codons. Most of the PCGs terminated with the stop codon TAA, whereas cox2 has the stop codon CAT. The phylogenetic tree showed that Larentiinae is close to Sterrhinae. The species of Ennominae form a monophyly. Taylor & Francis 2020-02-03 /pmc/articles/PMC7748719/ /pubmed/33366846 http://dx.doi.org/10.1080/23802359.2020.1720542 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xie, Jian-Lin
Sequencing and characterization of mitochondrial genome of Idaea effusaria (Lepidoptera: Geometridae)
title Sequencing and characterization of mitochondrial genome of Idaea effusaria (Lepidoptera: Geometridae)
title_full Sequencing and characterization of mitochondrial genome of Idaea effusaria (Lepidoptera: Geometridae)
title_fullStr Sequencing and characterization of mitochondrial genome of Idaea effusaria (Lepidoptera: Geometridae)
title_full_unstemmed Sequencing and characterization of mitochondrial genome of Idaea effusaria (Lepidoptera: Geometridae)
title_short Sequencing and characterization of mitochondrial genome of Idaea effusaria (Lepidoptera: Geometridae)
title_sort sequencing and characterization of mitochondrial genome of idaea effusaria (lepidoptera: geometridae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748719/
https://www.ncbi.nlm.nih.gov/pubmed/33366846
http://dx.doi.org/10.1080/23802359.2020.1720542
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