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The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae)

Solanum rostratum is native to Neotropics and southwestern United States and considered as an invasive plant in Americas, Europe, Asia, Africa, and Australia. However, information on the chloroplast (cp) genome of this species is limited. In this study, we present the complete chloroplast genome seq...

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Autores principales: Shi, Xiaojun, Qiu, Juan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748722/
https://www.ncbi.nlm.nih.gov/pubmed/33366676
http://dx.doi.org/10.1080/23802359.2020.1714506
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author Shi, Xiaojun
Qiu, Juan
author_facet Shi, Xiaojun
Qiu, Juan
author_sort Shi, Xiaojun
collection PubMed
description Solanum rostratum is native to Neotropics and southwestern United States and considered as an invasive plant in Americas, Europe, Asia, Africa, and Australia. However, information on the chloroplast (cp) genome of this species is limited. In this study, we present the complete chloroplast genome sequence of S. rostratum obtained by high-throughput nextgeneration sequencing technology. The whole cp genome was 155,559 bp long and comprised 130 genes, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The S. rostratum cp genome had a GC content of 37.76%. Based on the concatenated coding sequences of cp PCGs, phylogenetic analysis showed that Phylogenetic tree revealed that S. rostratum and S. elaeagnifolium are closely related to each other within the genus Solanum.
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spelling pubmed-77487222020-12-22 The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae) Shi, Xiaojun Qiu, Juan Mitochondrial DNA B Resour Mitogenome Announcement Solanum rostratum is native to Neotropics and southwestern United States and considered as an invasive plant in Americas, Europe, Asia, Africa, and Australia. However, information on the chloroplast (cp) genome of this species is limited. In this study, we present the complete chloroplast genome sequence of S. rostratum obtained by high-throughput nextgeneration sequencing technology. The whole cp genome was 155,559 bp long and comprised 130 genes, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The S. rostratum cp genome had a GC content of 37.76%. Based on the concatenated coding sequences of cp PCGs, phylogenetic analysis showed that Phylogenetic tree revealed that S. rostratum and S. elaeagnifolium are closely related to each other within the genus Solanum. Taylor & Francis 2020-01-14 /pmc/articles/PMC7748722/ /pubmed/33366676 http://dx.doi.org/10.1080/23802359.2020.1714506 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Shi, Xiaojun
Qiu, Juan
The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae)
title The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae)
title_full The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae)
title_fullStr The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae)
title_full_unstemmed The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae)
title_short The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae)
title_sort complete chloroplast genome sequence of an invasive plant solanum rostratum (solanaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748722/
https://www.ncbi.nlm.nih.gov/pubmed/33366676
http://dx.doi.org/10.1080/23802359.2020.1714506
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