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The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae)
Solanum rostratum is native to Neotropics and southwestern United States and considered as an invasive plant in Americas, Europe, Asia, Africa, and Australia. However, information on the chloroplast (cp) genome of this species is limited. In this study, we present the complete chloroplast genome seq...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748722/ https://www.ncbi.nlm.nih.gov/pubmed/33366676 http://dx.doi.org/10.1080/23802359.2020.1714506 |
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author | Shi, Xiaojun Qiu, Juan |
author_facet | Shi, Xiaojun Qiu, Juan |
author_sort | Shi, Xiaojun |
collection | PubMed |
description | Solanum rostratum is native to Neotropics and southwestern United States and considered as an invasive plant in Americas, Europe, Asia, Africa, and Australia. However, information on the chloroplast (cp) genome of this species is limited. In this study, we present the complete chloroplast genome sequence of S. rostratum obtained by high-throughput nextgeneration sequencing technology. The whole cp genome was 155,559 bp long and comprised 130 genes, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The S. rostratum cp genome had a GC content of 37.76%. Based on the concatenated coding sequences of cp PCGs, phylogenetic analysis showed that Phylogenetic tree revealed that S. rostratum and S. elaeagnifolium are closely related to each other within the genus Solanum. |
format | Online Article Text |
id | pubmed-7748722 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77487222020-12-22 The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae) Shi, Xiaojun Qiu, Juan Mitochondrial DNA B Resour Mitogenome Announcement Solanum rostratum is native to Neotropics and southwestern United States and considered as an invasive plant in Americas, Europe, Asia, Africa, and Australia. However, information on the chloroplast (cp) genome of this species is limited. In this study, we present the complete chloroplast genome sequence of S. rostratum obtained by high-throughput nextgeneration sequencing technology. The whole cp genome was 155,559 bp long and comprised 130 genes, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The S. rostratum cp genome had a GC content of 37.76%. Based on the concatenated coding sequences of cp PCGs, phylogenetic analysis showed that Phylogenetic tree revealed that S. rostratum and S. elaeagnifolium are closely related to each other within the genus Solanum. Taylor & Francis 2020-01-14 /pmc/articles/PMC7748722/ /pubmed/33366676 http://dx.doi.org/10.1080/23802359.2020.1714506 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Shi, Xiaojun Qiu, Juan The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae) |
title | The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae) |
title_full | The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae) |
title_fullStr | The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae) |
title_short | The complete chloroplast genome sequence of an invasive plant Solanum rostratum (Solanaceae) |
title_sort | complete chloroplast genome sequence of an invasive plant solanum rostratum (solanaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748722/ https://www.ncbi.nlm.nih.gov/pubmed/33366676 http://dx.doi.org/10.1080/23802359.2020.1714506 |
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