Complete chloroplast genome of Lycium ferocissimum (Solanaceae), a species native to South Africa

Lycium ferocissimum, known as African boxthorn or boxthorn, is a shrub in the Solanaceae family. In this study, we characterized the complete chloroplast (cp) genome sequence of L. ferocissimum using genome skimming data. It had a circular mapping molecular with the length of 155,894 bp, with a larg...

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Detalles Bibliográficos
Autores principales: Li, Zhao, Zhang, Xinyi, Zhang, Qingde, Yisilam, Gulbar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748727/
https://www.ncbi.nlm.nih.gov/pubmed/33366736
http://dx.doi.org/10.1080/23802359.2020.1715301
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author Li, Zhao
Zhang, Xinyi
Zhang, Qingde
Yisilam, Gulbar
author_facet Li, Zhao
Zhang, Xinyi
Zhang, Qingde
Yisilam, Gulbar
author_sort Li, Zhao
collection PubMed
description Lycium ferocissimum, known as African boxthorn or boxthorn, is a shrub in the Solanaceae family. In this study, we characterized the complete chloroplast (cp) genome sequence of L. ferocissimum using genome skimming data. It had a circular mapping molecular with the length of 155,894 bp, with a large single-copy region (LSC, 86,536 bp) and a small single-copy region (SSC, 18,406 bp) separated by a pair of inverted repeats (IRs, 25,476 bp). The cp genome encodes 113 unique genes, consisting of 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes, with 20 duplicated genes in the IR regions. The phylogenetic analysis indicated that L. ferocissimum is sister to the other three Lycium species.
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spelling pubmed-77487272020-12-22 Complete chloroplast genome of Lycium ferocissimum (Solanaceae), a species native to South Africa Li, Zhao Zhang, Xinyi Zhang, Qingde Yisilam, Gulbar Mitochondrial DNA B Resour Mitogenome Announcement Lycium ferocissimum, known as African boxthorn or boxthorn, is a shrub in the Solanaceae family. In this study, we characterized the complete chloroplast (cp) genome sequence of L. ferocissimum using genome skimming data. It had a circular mapping molecular with the length of 155,894 bp, with a large single-copy region (LSC, 86,536 bp) and a small single-copy region (SSC, 18,406 bp) separated by a pair of inverted repeats (IRs, 25,476 bp). The cp genome encodes 113 unique genes, consisting of 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes, with 20 duplicated genes in the IR regions. The phylogenetic analysis indicated that L. ferocissimum is sister to the other three Lycium species. Taylor & Francis 2020-01-21 /pmc/articles/PMC7748727/ /pubmed/33366736 http://dx.doi.org/10.1080/23802359.2020.1715301 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Zhao
Zhang, Xinyi
Zhang, Qingde
Yisilam, Gulbar
Complete chloroplast genome of Lycium ferocissimum (Solanaceae), a species native to South Africa
title Complete chloroplast genome of Lycium ferocissimum (Solanaceae), a species native to South Africa
title_full Complete chloroplast genome of Lycium ferocissimum (Solanaceae), a species native to South Africa
title_fullStr Complete chloroplast genome of Lycium ferocissimum (Solanaceae), a species native to South Africa
title_full_unstemmed Complete chloroplast genome of Lycium ferocissimum (Solanaceae), a species native to South Africa
title_short Complete chloroplast genome of Lycium ferocissimum (Solanaceae), a species native to South Africa
title_sort complete chloroplast genome of lycium ferocissimum (solanaceae), a species native to south africa
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748727/
https://www.ncbi.nlm.nih.gov/pubmed/33366736
http://dx.doi.org/10.1080/23802359.2020.1715301
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