The complete chloroplast genome sequence of Cinnamomum kotoense

The first complete chloroplast genome (cpDNA) sequence of Cinnamomum kotoense was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 154,010 bp in length, contains a large single copy region (LSC) of 93,676 bp and a small single copy region (SSC) of 18,830 bp, which...

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Detalles Bibliográficos
Autores principales: Yuan, Xiaolong, Li, Yunqing, Wang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748733/
https://www.ncbi.nlm.nih.gov/pubmed/33366543
http://dx.doi.org/10.1080/23802359.2019.1703604
Descripción
Sumario:The first complete chloroplast genome (cpDNA) sequence of Cinnamomum kotoense was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 154,010 bp in length, contains a large single copy region (LSC) of 93,676 bp and a small single copy region (SSC) of 18,830 bp, which were separated by a pair of inverted repeats (IR) regions of 20,752 bp. The genome contains 127 genes, including 82 protein-coding genes, 8 ribosomal RNA genes, and 36 transfer RNA genes. The overall GC content of the whole genome is 39.2%, and the corresponding values of the LSC, SSC, and IR regions are 37.9%, 33.9%, and 44.3%, respectively. Further phylogenomic analysis showed that C. kotoense and Cinnamomum bodinieri clustered in a clade in Cinnamomum genus.

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