The complete chloroplast genome sequence of Elsholtzia densa, a herb with volatile aroma component

The complete chloroplast genome sequence of Elsholtzia densa was analysed. The results indicated that the size of the chloroplast genome was 149,095 bp in length with a large single-copy region (LSC) of 81,497 bp, a small single-copy region (SSC) of 17,364 bp, and a pair of inverted repeat (IR) regi...

Descripción completa

Detalles Bibliográficos
Autores principales: Fu, Gui, Liu, Jing, Li, Junqiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748739/
https://www.ncbi.nlm.nih.gov/pubmed/33366662
http://dx.doi.org/10.1080/23802359.2019.1710597
_version_ 1783625181450731520
author Fu, Gui
Liu, Jing
Li, Junqiao
author_facet Fu, Gui
Liu, Jing
Li, Junqiao
author_sort Fu, Gui
collection PubMed
description The complete chloroplast genome sequence of Elsholtzia densa was analysed. The results indicated that the size of the chloroplast genome was 149,095 bp in length with a large single-copy region (LSC) of 81,497 bp, a small single-copy region (SSC) of 17,364 bp, and a pair of inverted repeat (IR) regions of 25,117bp. The overall GC content of the cpDNA genome was 37.86%, while the corresponding values of the LSC, SSC, and IR regions were 35.96%, 31.92%, and 43.16%, respectively. A total of 132 functional genes were identified, including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The maximum likelihood phylogenetic tree suggested that E. densa was closely related to the species in the family Labiatae.
format Online
Article
Text
id pubmed-7748739
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77487392020-12-22 The complete chloroplast genome sequence of Elsholtzia densa, a herb with volatile aroma component Fu, Gui Liu, Jing Li, Junqiao Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Elsholtzia densa was analysed. The results indicated that the size of the chloroplast genome was 149,095 bp in length with a large single-copy region (LSC) of 81,497 bp, a small single-copy region (SSC) of 17,364 bp, and a pair of inverted repeat (IR) regions of 25,117bp. The overall GC content of the cpDNA genome was 37.86%, while the corresponding values of the LSC, SSC, and IR regions were 35.96%, 31.92%, and 43.16%, respectively. A total of 132 functional genes were identified, including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The maximum likelihood phylogenetic tree suggested that E. densa was closely related to the species in the family Labiatae. Taylor & Francis 2020-01-14 /pmc/articles/PMC7748739/ /pubmed/33366662 http://dx.doi.org/10.1080/23802359.2019.1710597 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Fu, Gui
Liu, Jing
Li, Junqiao
The complete chloroplast genome sequence of Elsholtzia densa, a herb with volatile aroma component
title The complete chloroplast genome sequence of Elsholtzia densa, a herb with volatile aroma component
title_full The complete chloroplast genome sequence of Elsholtzia densa, a herb with volatile aroma component
title_fullStr The complete chloroplast genome sequence of Elsholtzia densa, a herb with volatile aroma component
title_full_unstemmed The complete chloroplast genome sequence of Elsholtzia densa, a herb with volatile aroma component
title_short The complete chloroplast genome sequence of Elsholtzia densa, a herb with volatile aroma component
title_sort complete chloroplast genome sequence of elsholtzia densa, a herb with volatile aroma component
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748739/
https://www.ncbi.nlm.nih.gov/pubmed/33366662
http://dx.doi.org/10.1080/23802359.2019.1710597
work_keys_str_mv AT fugui thecompletechloroplastgenomesequenceofelsholtziadensaaherbwithvolatilearomacomponent
AT liujing thecompletechloroplastgenomesequenceofelsholtziadensaaherbwithvolatilearomacomponent
AT lijunqiao thecompletechloroplastgenomesequenceofelsholtziadensaaherbwithvolatilearomacomponent
AT fugui completechloroplastgenomesequenceofelsholtziadensaaherbwithvolatilearomacomponent
AT liujing completechloroplastgenomesequenceofelsholtziadensaaherbwithvolatilearomacomponent
AT lijunqiao completechloroplastgenomesequenceofelsholtziadensaaherbwithvolatilearomacomponent

Ejemplares similares