Characterization of the complete chloroplast genome sequence of Anisodus acutangulus (Solanaceae)

Anisodus acutangulus is a Solanaceae perennial plant, which is endemic to China and classified as an endangered species. In this study, we have sequenced the complete chloroplast genome of A. acutangulus, which is 156,079 bp in length, containing a large single-copy (LSC) region of 86,526 bp, a smal...

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Autores principales: Tian, Xing, Bai, Ji-Qing, Yang, Cong-Wei, Zhang, Ying-Min, Li, Guo-Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748740/
https://www.ncbi.nlm.nih.gov/pubmed/33366800
http://dx.doi.org/10.1080/23802359.2020.1717387
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author Tian, Xing
Bai, Ji-Qing
Yang, Cong-Wei
Zhang, Ying-Min
Li, Guo-Dong
author_facet Tian, Xing
Bai, Ji-Qing
Yang, Cong-Wei
Zhang, Ying-Min
Li, Guo-Dong
author_sort Tian, Xing
collection PubMed
description Anisodus acutangulus is a Solanaceae perennial plant, which is endemic to China and classified as an endangered species. In this study, we have sequenced the complete chloroplast genome of A. acutangulus, which is 156,079 bp in length, containing a large single-copy (LSC) region of 86,526 bp, a small single-copy (SSC) region of 17,741 bp and comprises a pair of inverted repeat regions (IRs) of 25,906 bp. Totally 134 genes were annotated, including 87 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Its overall GC content is 37.6%. Phylogenetic analysis using total chloroplast genome DNA sequence of 21 species revealed that A. acutangulus was closely related to Hyoscyamus niger with 100% bootstrap value.
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spelling pubmed-77487402020-12-22 Characterization of the complete chloroplast genome sequence of Anisodus acutangulus (Solanaceae) Tian, Xing Bai, Ji-Qing Yang, Cong-Wei Zhang, Ying-Min Li, Guo-Dong Mitochondrial DNA B Resour Mitogenome Announcement Anisodus acutangulus is a Solanaceae perennial plant, which is endemic to China and classified as an endangered species. In this study, we have sequenced the complete chloroplast genome of A. acutangulus, which is 156,079 bp in length, containing a large single-copy (LSC) region of 86,526 bp, a small single-copy (SSC) region of 17,741 bp and comprises a pair of inverted repeat regions (IRs) of 25,906 bp. Totally 134 genes were annotated, including 87 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Its overall GC content is 37.6%. Phylogenetic analysis using total chloroplast genome DNA sequence of 21 species revealed that A. acutangulus was closely related to Hyoscyamus niger with 100% bootstrap value. Taylor & Francis 2020-01-27 /pmc/articles/PMC7748740/ /pubmed/33366800 http://dx.doi.org/10.1080/23802359.2020.1717387 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Tian, Xing
Bai, Ji-Qing
Yang, Cong-Wei
Zhang, Ying-Min
Li, Guo-Dong
Characterization of the complete chloroplast genome sequence of Anisodus acutangulus (Solanaceae)
title Characterization of the complete chloroplast genome sequence of Anisodus acutangulus (Solanaceae)
title_full Characterization of the complete chloroplast genome sequence of Anisodus acutangulus (Solanaceae)
title_fullStr Characterization of the complete chloroplast genome sequence of Anisodus acutangulus (Solanaceae)
title_full_unstemmed Characterization of the complete chloroplast genome sequence of Anisodus acutangulus (Solanaceae)
title_short Characterization of the complete chloroplast genome sequence of Anisodus acutangulus (Solanaceae)
title_sort characterization of the complete chloroplast genome sequence of anisodus acutangulus (solanaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748740/
https://www.ncbi.nlm.nih.gov/pubmed/33366800
http://dx.doi.org/10.1080/23802359.2020.1717387
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