Characterization of the complete chloroplast genome of Gentiana rhodantha (Gentianaceae)

The first complete chloroplast genome (cp) sequences of Gentiana rhodantha were reported in this study. The cp genome of G. rhodantha was 148,967 bp in size, with two inverted repeat (IR) regions of 25,760 bp, the large single copy (LSC) region of 79,831 bp, and the small single copy (SSC) region of...

Descripción completa

Detalles Bibliográficos
Autor principal: Ling, Li-Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748746/
https://www.ncbi.nlm.nih.gov/pubmed/33366804
http://dx.doi.org/10.1080/23802359.2020.1718026
_version_ 1783625183101190144
author Ling, Li-Zhen
author_facet Ling, Li-Zhen
author_sort Ling, Li-Zhen
collection PubMed
description The first complete chloroplast genome (cp) sequences of Gentiana rhodantha were reported in this study. The cp genome of G. rhodantha was 148,967 bp in size, with two inverted repeat (IR) regions of 25,760 bp, the large single copy (LSC) region of 79,831 bp, and the small single copy (SSC) region of 17,616 bp. The cp genome contained 112 genes, including 78 protein-coding genes, 4 ribosomal RNA, and 30 transfer RNA genes. The overall GC content was 36.4%. Phylogenetic analysis of the cp genomes within the tribe Gentianeae suggests that G. rhodantha is in a sister clade of other subtribe Gentianinae.
format Online
Article
Text
id pubmed-7748746
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77487462020-12-22 Characterization of the complete chloroplast genome of Gentiana rhodantha (Gentianaceae) Ling, Li-Zhen Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome (cp) sequences of Gentiana rhodantha were reported in this study. The cp genome of G. rhodantha was 148,967 bp in size, with two inverted repeat (IR) regions of 25,760 bp, the large single copy (LSC) region of 79,831 bp, and the small single copy (SSC) region of 17,616 bp. The cp genome contained 112 genes, including 78 protein-coding genes, 4 ribosomal RNA, and 30 transfer RNA genes. The overall GC content was 36.4%. Phylogenetic analysis of the cp genomes within the tribe Gentianeae suggests that G. rhodantha is in a sister clade of other subtribe Gentianinae. Taylor & Francis 2020-01-27 /pmc/articles/PMC7748746/ /pubmed/33366804 http://dx.doi.org/10.1080/23802359.2020.1718026 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ling, Li-Zhen
Characterization of the complete chloroplast genome of Gentiana rhodantha (Gentianaceae)
title Characterization of the complete chloroplast genome of Gentiana rhodantha (Gentianaceae)
title_full Characterization of the complete chloroplast genome of Gentiana rhodantha (Gentianaceae)
title_fullStr Characterization of the complete chloroplast genome of Gentiana rhodantha (Gentianaceae)
title_full_unstemmed Characterization of the complete chloroplast genome of Gentiana rhodantha (Gentianaceae)
title_short Characterization of the complete chloroplast genome of Gentiana rhodantha (Gentianaceae)
title_sort characterization of the complete chloroplast genome of gentiana rhodantha (gentianaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748746/
https://www.ncbi.nlm.nih.gov/pubmed/33366804
http://dx.doi.org/10.1080/23802359.2020.1718026
work_keys_str_mv AT linglizhen characterizationofthecompletechloroplastgenomeofgentianarhodanthagentianaceae

Ejemplares similares