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Characterization of the complete chloroplast genome of Leycesteria formosa wall. (Caprifoliaceae), a medicinal plant in southwest China
Leycesteria formosa is a frequently used medicinal plant (namely, ‘Yi yao’) in Southwest China. In this study, we sequenced the complete chloroplast (cp) genome sequence of L. formosa to investigate its phylogenetic relationship in the family Caprifoliaceae. The chloroplast genome of L. formosa was...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748767/ https://www.ncbi.nlm.nih.gov/pubmed/33366620 http://dx.doi.org/10.1080/23802359.2019.1704652 |
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author | Zhang, Haizhu |
author_facet | Zhang, Haizhu |
author_sort | Zhang, Haizhu |
collection | PubMed |
description | Leycesteria formosa is a frequently used medicinal plant (namely, ‘Yi yao’) in Southwest China. In this study, we sequenced the complete chloroplast (cp) genome sequence of L. formosa to investigate its phylogenetic relationship in the family Caprifoliaceae. The chloroplast genome of L. formosa was 156,261 bp in length with 38.1% overall GC content, including a large single-copy (LSC) region of 90,353 bp, a small single-copy (SSC) region of 19,299 bp and a pair of inverted repeats (IRs) of 23,287 bp. The cp genome contained 112 genes, including 79 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. The phylogenetic analysis indicated Leycesteria was closely related to the genus Triosteum or Heptacodium. |
format | Online Article Text |
id | pubmed-7748767 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77487672020-12-22 Characterization of the complete chloroplast genome of Leycesteria formosa wall. (Caprifoliaceae), a medicinal plant in southwest China Zhang, Haizhu Mitochondrial DNA B Resour Mitogenome Announcement Leycesteria formosa is a frequently used medicinal plant (namely, ‘Yi yao’) in Southwest China. In this study, we sequenced the complete chloroplast (cp) genome sequence of L. formosa to investigate its phylogenetic relationship in the family Caprifoliaceae. The chloroplast genome of L. formosa was 156,261 bp in length with 38.1% overall GC content, including a large single-copy (LSC) region of 90,353 bp, a small single-copy (SSC) region of 19,299 bp and a pair of inverted repeats (IRs) of 23,287 bp. The cp genome contained 112 genes, including 79 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. The phylogenetic analysis indicated Leycesteria was closely related to the genus Triosteum or Heptacodium. Taylor & Francis 2020-01-10 /pmc/articles/PMC7748767/ /pubmed/33366620 http://dx.doi.org/10.1080/23802359.2019.1704652 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhang, Haizhu Characterization of the complete chloroplast genome of Leycesteria formosa wall. (Caprifoliaceae), a medicinal plant in southwest China |
title | Characterization of the complete chloroplast genome of Leycesteria formosa wall. (Caprifoliaceae), a medicinal plant in southwest China |
title_full | Characterization of the complete chloroplast genome of Leycesteria formosa wall. (Caprifoliaceae), a medicinal plant in southwest China |
title_fullStr | Characterization of the complete chloroplast genome of Leycesteria formosa wall. (Caprifoliaceae), a medicinal plant in southwest China |
title_full_unstemmed | Characterization of the complete chloroplast genome of Leycesteria formosa wall. (Caprifoliaceae), a medicinal plant in southwest China |
title_short | Characterization of the complete chloroplast genome of Leycesteria formosa wall. (Caprifoliaceae), a medicinal plant in southwest China |
title_sort | characterization of the complete chloroplast genome of leycesteria formosa wall. (caprifoliaceae), a medicinal plant in southwest china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748767/ https://www.ncbi.nlm.nih.gov/pubmed/33366620 http://dx.doi.org/10.1080/23802359.2019.1704652 |
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