Complete chloroplast genome sequence of Gigantochloa verticillata (Bambusodae)

Gigantochloa verticillata is produced in Mengla and Jinghong, Yunnan Province, China, and cultivated in Hong Kong. Vietnam, Thailand, India, Indonesia, and Malaysia are distributed and cultivated. We determined the complete chloroplast genome sequence for G. verticillata using Illumina sequencing da...

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Autores principales: Zhang, Yang-Yang, Fan, Li-Li, Zheng, Feng-Ying, Zhao, Ting, Rong, Jun-Dong, Chen, Li-Guang, Zheng, Yu-Shan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748771/
https://www.ncbi.nlm.nih.gov/pubmed/33366532
http://dx.doi.org/10.1080/23802359.2019.1702484
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author Zhang, Yang-Yang
Fan, Li-Li
Zheng, Feng-Ying
Zhao, Ting
Rong, Jun-Dong
Chen, Li-Guang
Zheng, Yu-Shan
author_facet Zhang, Yang-Yang
Fan, Li-Li
Zheng, Feng-Ying
Zhao, Ting
Rong, Jun-Dong
Chen, Li-Guang
Zheng, Yu-Shan
author_sort Zhang, Yang-Yang
collection PubMed
description Gigantochloa verticillata is produced in Mengla and Jinghong, Yunnan Province, China, and cultivated in Hong Kong. Vietnam, Thailand, India, Indonesia, and Malaysia are distributed and cultivated. We determined the complete chloroplast genome sequence for G. verticillata using Illumina sequencing data. The complete chloroplast sequence is 139,489 bp, including large single-copy (LSC) region of 83,062 bp, small single-copy (SSC) region of 12,877 bp, and a pair of invert repeats (IR) regions of 21,775 bp. Plastid genome contain 132 genes, 85 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 23 chloroplast genomes indicates that G. verticillata is closely related to Dendrocalamus latiflorus in Bambusodae.
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spelling pubmed-77487712020-12-22 Complete chloroplast genome sequence of Gigantochloa verticillata (Bambusodae) Zhang, Yang-Yang Fan, Li-Li Zheng, Feng-Ying Zhao, Ting Rong, Jun-Dong Chen, Li-Guang Zheng, Yu-Shan Mitochondrial DNA B Resour Mitogenome Announcement Gigantochloa verticillata is produced in Mengla and Jinghong, Yunnan Province, China, and cultivated in Hong Kong. Vietnam, Thailand, India, Indonesia, and Malaysia are distributed and cultivated. We determined the complete chloroplast genome sequence for G. verticillata using Illumina sequencing data. The complete chloroplast sequence is 139,489 bp, including large single-copy (LSC) region of 83,062 bp, small single-copy (SSC) region of 12,877 bp, and a pair of invert repeats (IR) regions of 21,775 bp. Plastid genome contain 132 genes, 85 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 23 chloroplast genomes indicates that G. verticillata is closely related to Dendrocalamus latiflorus in Bambusodae. Taylor & Francis 2020-02-06 /pmc/articles/PMC7748771/ /pubmed/33366532 http://dx.doi.org/10.1080/23802359.2019.1702484 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Yang-Yang
Fan, Li-Li
Zheng, Feng-Ying
Zhao, Ting
Rong, Jun-Dong
Chen, Li-Guang
Zheng, Yu-Shan
Complete chloroplast genome sequence of Gigantochloa verticillata (Bambusodae)
title Complete chloroplast genome sequence of Gigantochloa verticillata (Bambusodae)
title_full Complete chloroplast genome sequence of Gigantochloa verticillata (Bambusodae)
title_fullStr Complete chloroplast genome sequence of Gigantochloa verticillata (Bambusodae)
title_full_unstemmed Complete chloroplast genome sequence of Gigantochloa verticillata (Bambusodae)
title_short Complete chloroplast genome sequence of Gigantochloa verticillata (Bambusodae)
title_sort complete chloroplast genome sequence of gigantochloa verticillata (bambusodae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748771/
https://www.ncbi.nlm.nih.gov/pubmed/33366532
http://dx.doi.org/10.1080/23802359.2019.1702484
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