Characterization of the complete chloroplast genome of Cornus bretschneideri (cornaceae)

Cornus bretschneideri L.Henry (Cornaceae), a shrub or small tree, is a potential horticultural plant or a soil-fixing plant. In this study, the complete sequence and characterization of the chloroplast genome of C. bretschneideri was studied. The size of the chloroplast genome is 158,270 bp in lengt...

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Autores principales: Li, Xiaojuan, Ma, Qian, Zhou, Huakun, Yang, Yongsheng, Li, Huimei, Wang, Jiuli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748772/
https://www.ncbi.nlm.nih.gov/pubmed/33366639
http://dx.doi.org/10.1080/23802359.2019.1710281
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author Li, Xiaojuan
Ma, Qian
Zhou, Huakun
Yang, Yongsheng
Li, Huimei
Wang, Jiuli
author_facet Li, Xiaojuan
Ma, Qian
Zhou, Huakun
Yang, Yongsheng
Li, Huimei
Wang, Jiuli
author_sort Li, Xiaojuan
collection PubMed
description Cornus bretschneideri L.Henry (Cornaceae), a shrub or small tree, is a potential horticultural plant or a soil-fixing plant. In this study, the complete sequence and characterization of the chloroplast genome of C. bretschneideri was studied. The size of the chloroplast genome is 158,270 bp in length, including a large single copy region (LSC) of 87,466 bp, a small single copy region (SSC) of 18,730 bp, and a pair of inverted repeat (IR) regions with 26,037 bp. The GC content of the chloroplast genome was 37.86%. Moreover, a total of 132 functional genes were annotated, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The neighbor-joining phylogenetic tree suggested that C. bretschneideri was closely related to C. sanguinea and C. macrophylla.
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spelling pubmed-77487722020-12-22 Characterization of the complete chloroplast genome of Cornus bretschneideri (cornaceae) Li, Xiaojuan Ma, Qian Zhou, Huakun Yang, Yongsheng Li, Huimei Wang, Jiuli Mitochondrial DNA B Resour Mitogenome Announcement Cornus bretschneideri L.Henry (Cornaceae), a shrub or small tree, is a potential horticultural plant or a soil-fixing plant. In this study, the complete sequence and characterization of the chloroplast genome of C. bretschneideri was studied. The size of the chloroplast genome is 158,270 bp in length, including a large single copy region (LSC) of 87,466 bp, a small single copy region (SSC) of 18,730 bp, and a pair of inverted repeat (IR) regions with 26,037 bp. The GC content of the chloroplast genome was 37.86%. Moreover, a total of 132 functional genes were annotated, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The neighbor-joining phylogenetic tree suggested that C. bretschneideri was closely related to C. sanguinea and C. macrophylla. Taylor & Francis 2020-01-14 /pmc/articles/PMC7748772/ /pubmed/33366639 http://dx.doi.org/10.1080/23802359.2019.1710281 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Xiaojuan
Ma, Qian
Zhou, Huakun
Yang, Yongsheng
Li, Huimei
Wang, Jiuli
Characterization of the complete chloroplast genome of Cornus bretschneideri (cornaceae)
title Characterization of the complete chloroplast genome of Cornus bretschneideri (cornaceae)
title_full Characterization of the complete chloroplast genome of Cornus bretschneideri (cornaceae)
title_fullStr Characterization of the complete chloroplast genome of Cornus bretschneideri (cornaceae)
title_full_unstemmed Characterization of the complete chloroplast genome of Cornus bretschneideri (cornaceae)
title_short Characterization of the complete chloroplast genome of Cornus bretschneideri (cornaceae)
title_sort characterization of the complete chloroplast genome of cornus bretschneideri (cornaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748772/
https://www.ncbi.nlm.nih.gov/pubmed/33366639
http://dx.doi.org/10.1080/23802359.2019.1710281
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