Sequencing and analysis of the complete mitochondrial genome of Bactrocera cheni from China and its phylogenetic analysis

The complete mitochondrial genome (mitogenome) of the Bactrocera cheni (Diptera: Tephritidae: Dacinae) are sequenced and annotated. The mitochondrial genome is 15,945 bp (GenBank No. MN883026), with A + T% for the whole sequence = 73.0% (38.9% A, 16.4% C, 10.6% G, and 34.1% T), which is the classica...

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Autores principales: Wang, Tao, Ren, Yan-ling, Zhong, Yong, Yang, Mao-fa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748785/
https://www.ncbi.nlm.nih.gov/pubmed/33366748
http://dx.doi.org/10.1080/23802359.2020.1715882
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author Wang, Tao
Ren, Yan-ling
Zhong, Yong
Yang, Mao-fa
author_facet Wang, Tao
Ren, Yan-ling
Zhong, Yong
Yang, Mao-fa
author_sort Wang, Tao
collection PubMed
description The complete mitochondrial genome (mitogenome) of the Bactrocera cheni (Diptera: Tephritidae: Dacinae) are sequenced and annotated. The mitochondrial genome is 15,945 bp (GenBank No. MN883026), with A + T% for the whole sequence = 73.0% (38.9% A, 16.4% C, 10.6% G, and 34.1% T), which is the classical structure for insect mitogenome. All PCGs started with ATN except ATP8; 9 PCGs use TAA as the stop codon, and others use TAG as the stop codon. The phylogenetic tree confirms that B. cheni and B. tsuneonis are not clade into one branch with strongly supported. And Pairwise Identity is 80.0% between B. cheni and B. tsuneonis. Based this study, we supported that B. cheni and B. tsuneonis are two different species clearly.
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spelling pubmed-77487852020-12-22 Sequencing and analysis of the complete mitochondrial genome of Bactrocera cheni from China and its phylogenetic analysis Wang, Tao Ren, Yan-ling Zhong, Yong Yang, Mao-fa Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome (mitogenome) of the Bactrocera cheni (Diptera: Tephritidae: Dacinae) are sequenced and annotated. The mitochondrial genome is 15,945 bp (GenBank No. MN883026), with A + T% for the whole sequence = 73.0% (38.9% A, 16.4% C, 10.6% G, and 34.1% T), which is the classical structure for insect mitogenome. All PCGs started with ATN except ATP8; 9 PCGs use TAA as the stop codon, and others use TAG as the stop codon. The phylogenetic tree confirms that B. cheni and B. tsuneonis are not clade into one branch with strongly supported. And Pairwise Identity is 80.0% between B. cheni and B. tsuneonis. Based this study, we supported that B. cheni and B. tsuneonis are two different species clearly. Taylor & Francis 2020-01-22 /pmc/articles/PMC7748785/ /pubmed/33366748 http://dx.doi.org/10.1080/23802359.2020.1715882 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Tao
Ren, Yan-ling
Zhong, Yong
Yang, Mao-fa
Sequencing and analysis of the complete mitochondrial genome of Bactrocera cheni from China and its phylogenetic analysis
title Sequencing and analysis of the complete mitochondrial genome of Bactrocera cheni from China and its phylogenetic analysis
title_full Sequencing and analysis of the complete mitochondrial genome of Bactrocera cheni from China and its phylogenetic analysis
title_fullStr Sequencing and analysis of the complete mitochondrial genome of Bactrocera cheni from China and its phylogenetic analysis
title_full_unstemmed Sequencing and analysis of the complete mitochondrial genome of Bactrocera cheni from China and its phylogenetic analysis
title_short Sequencing and analysis of the complete mitochondrial genome of Bactrocera cheni from China and its phylogenetic analysis
title_sort sequencing and analysis of the complete mitochondrial genome of bactrocera cheni from china and its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748785/
https://www.ncbi.nlm.nih.gov/pubmed/33366748
http://dx.doi.org/10.1080/23802359.2020.1715882
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