Characterization of the complete chloroplast genome and phylogenetic analysis of Silene jenisseensis (Caryophyllaceae)

The first complete chloroplast genome (cp) sequences of Silene jenisseensis were reported in this study. The S. jenisseensis cp genome was 150,299 bp in size, with two inverted repeat (IR) regions of 25,384 bp, the large single-copy (LSC) region of 82,153 bp, and the small single-copy (SSC) region o...

Descripción completa

Detalles Bibliográficos
Autor principal: Ling, Li-Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748790/
https://www.ncbi.nlm.nih.gov/pubmed/33366609
http://dx.doi.org/10.1080/23802359.2019.1704654
_version_ 1783625193212608512
author Ling, Li-Zhen
author_facet Ling, Li-Zhen
author_sort Ling, Li-Zhen
collection PubMed
description The first complete chloroplast genome (cp) sequences of Silene jenisseensis were reported in this study. The S. jenisseensis cp genome was 150,299 bp in size, with two inverted repeat (IR) regions of 25,384 bp, the large single-copy (LSC) region of 82,153 bp, and the small single-copy (SSC) region of 17,378 bp. The cp genome of this species contained 111 genes, including 77 protein-coding genes, 4 ribosomal RNA, and 30 transfer RNA genes. The overall GC content was 36.4%. Phylogenetic analysis of the cp genomes within the Caryophyllaceae family suggests that S. jenisseensis is closer to the clade formed by S. capitata and S. aprica.
format Online
Article
Text
id pubmed-7748790
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77487902020-12-22 Characterization of the complete chloroplast genome and phylogenetic analysis of Silene jenisseensis (Caryophyllaceae) Ling, Li-Zhen Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome (cp) sequences of Silene jenisseensis were reported in this study. The S. jenisseensis cp genome was 150,299 bp in size, with two inverted repeat (IR) regions of 25,384 bp, the large single-copy (LSC) region of 82,153 bp, and the small single-copy (SSC) region of 17,378 bp. The cp genome of this species contained 111 genes, including 77 protein-coding genes, 4 ribosomal RNA, and 30 transfer RNA genes. The overall GC content was 36.4%. Phylogenetic analysis of the cp genomes within the Caryophyllaceae family suggests that S. jenisseensis is closer to the clade formed by S. capitata and S. aprica. Taylor & Francis 2020-01-10 /pmc/articles/PMC7748790/ /pubmed/33366609 http://dx.doi.org/10.1080/23802359.2019.1704654 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ling, Li-Zhen
Characterization of the complete chloroplast genome and phylogenetic analysis of Silene jenisseensis (Caryophyllaceae)
title Characterization of the complete chloroplast genome and phylogenetic analysis of Silene jenisseensis (Caryophyllaceae)
title_full Characterization of the complete chloroplast genome and phylogenetic analysis of Silene jenisseensis (Caryophyllaceae)
title_fullStr Characterization of the complete chloroplast genome and phylogenetic analysis of Silene jenisseensis (Caryophyllaceae)
title_full_unstemmed Characterization of the complete chloroplast genome and phylogenetic analysis of Silene jenisseensis (Caryophyllaceae)
title_short Characterization of the complete chloroplast genome and phylogenetic analysis of Silene jenisseensis (Caryophyllaceae)
title_sort characterization of the complete chloroplast genome and phylogenetic analysis of silene jenisseensis (caryophyllaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748790/
https://www.ncbi.nlm.nih.gov/pubmed/33366609
http://dx.doi.org/10.1080/23802359.2019.1704654
work_keys_str_mv AT linglizhen characterizationofthecompletechloroplastgenomeandphylogeneticanalysisofsilenejenisseensiscaryophyllaceae

Ejemplares similares