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Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis

Scrophularia ningpoensis has been used as a famous traditional medicinal herb in Asian countries to treat jaundice, dysentery, and the pain of rheumatism. In this paper, the complete chloroplast (cp) genome sequence of S. ningpoensis was reported and characterized. The cp genome is 153,175 bp in len...

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Autores principales: Ai, Hong-Lian, Qin, Chun-Lun, Ye, Ke, Li, Zheng-Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748792/
https://www.ncbi.nlm.nih.gov/pubmed/33366613
http://dx.doi.org/10.1080/23802359.2019.1705926
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author Ai, Hong-Lian
Qin, Chun-Lun
Ye, Ke
Li, Zheng-Hui
author_facet Ai, Hong-Lian
Qin, Chun-Lun
Ye, Ke
Li, Zheng-Hui
author_sort Ai, Hong-Lian
collection PubMed
description Scrophularia ningpoensis has been used as a famous traditional medicinal herb in Asian countries to treat jaundice, dysentery, and the pain of rheumatism. In this paper, the complete chloroplast (cp) genome sequence of S. ningpoensis was reported and characterized. The cp genome is 153,175 bp in length, composed of a pair of 25,490 bp inverted repeat (IR) regions separated by a large single copy (LSC) region of 84,257 bp and a small single copy (SSC) region of 17,938 bp. There were 130 predicted genes (85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes) in the genome, and the overall GC content of the genome is 38%. Phylogenetic analysis based on the cp genome data showed that S. ningpoensis was sister to S. buergeriana.
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spelling pubmed-77487922020-12-22 Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis Ai, Hong-Lian Qin, Chun-Lun Ye, Ke Li, Zheng-Hui Mitochondrial DNA B Resour Mitogenome Announcement Scrophularia ningpoensis has been used as a famous traditional medicinal herb in Asian countries to treat jaundice, dysentery, and the pain of rheumatism. In this paper, the complete chloroplast (cp) genome sequence of S. ningpoensis was reported and characterized. The cp genome is 153,175 bp in length, composed of a pair of 25,490 bp inverted repeat (IR) regions separated by a large single copy (LSC) region of 84,257 bp and a small single copy (SSC) region of 17,938 bp. There were 130 predicted genes (85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes) in the genome, and the overall GC content of the genome is 38%. Phylogenetic analysis based on the cp genome data showed that S. ningpoensis was sister to S. buergeriana. Taylor & Francis 2020-01-13 /pmc/articles/PMC7748792/ /pubmed/33366613 http://dx.doi.org/10.1080/23802359.2019.1705926 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ai, Hong-Lian
Qin, Chun-Lun
Ye, Ke
Li, Zheng-Hui
Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis
title Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis
title_full Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis
title_fullStr Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis
title_full_unstemmed Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis
title_short Characterization of the complete chloroplast genome of a well-known Chinese medicinal herb, Scrophularia ningpoensis
title_sort characterization of the complete chloroplast genome of a well-known chinese medicinal herb, scrophularia ningpoensis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748792/
https://www.ncbi.nlm.nih.gov/pubmed/33366613
http://dx.doi.org/10.1080/23802359.2019.1705926
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