The complete chloroplast genome of Epimedium qingchengshanense G. Y. Zhong et B. L. Guo (Berberidaceae), an endangered species endemic to China

Epimedium qingchengshanense G. Y. Zhong & B. L. Guo is an endangered species with high ornamental value and medicinal value in China. In this study, we reported the first complete chloroplast (cp) genome of E. qingchengshanense. The whole cp genome of E. qingchengshanense is 159,087 bp in length...

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Autores principales: Luo, Yanjiao, Liu, Xiang, Yu, Yao, Yang, Qianru, Guo, Baolin, Xu, Chaoqun, Suo, Fengmei, Zhang, Cheng, Shen, Guoan, Chen, Anjia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748797/
https://www.ncbi.nlm.nih.gov/pubmed/33366755
http://dx.doi.org/10.1080/23802359.2020.1715295
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author Luo, Yanjiao
Liu, Xiang
Yu, Yao
Yang, Qianru
Guo, Baolin
Xu, Chaoqun
Suo, Fengmei
Zhang, Cheng
Shen, Guoan
Chen, Anjia
author_facet Luo, Yanjiao
Liu, Xiang
Yu, Yao
Yang, Qianru
Guo, Baolin
Xu, Chaoqun
Suo, Fengmei
Zhang, Cheng
Shen, Guoan
Chen, Anjia
author_sort Luo, Yanjiao
collection PubMed
description Epimedium qingchengshanense G. Y. Zhong & B. L. Guo is an endangered species with high ornamental value and medicinal value in China. In this study, we reported the first complete chloroplast (cp) genome of E. qingchengshanense. The whole cp genome of E. qingchengshanense is 159,087 bp in length, comprising a pair of inverted repeat regions (IRs) (27,709 bp) that are separated by a large single-copy (LSC) region (86,607 bp) and a small single-copy (SSC) region (17,062 bp). The circular genome contains 112 unique genes, of which 78 are protein-coding genes, 30 tRNA, and 4 rRNA genes. Phylogenetic analysis shows that E. qingchengshanense has a closer relationship with other Epimedium species.
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spelling pubmed-77487972020-12-22 The complete chloroplast genome of Epimedium qingchengshanense G. Y. Zhong et B. L. Guo (Berberidaceae), an endangered species endemic to China Luo, Yanjiao Liu, Xiang Yu, Yao Yang, Qianru Guo, Baolin Xu, Chaoqun Suo, Fengmei Zhang, Cheng Shen, Guoan Chen, Anjia Mitochondrial DNA B Resour Mitogenome Announcement Epimedium qingchengshanense G. Y. Zhong & B. L. Guo is an endangered species with high ornamental value and medicinal value in China. In this study, we reported the first complete chloroplast (cp) genome of E. qingchengshanense. The whole cp genome of E. qingchengshanense is 159,087 bp in length, comprising a pair of inverted repeat regions (IRs) (27,709 bp) that are separated by a large single-copy (LSC) region (86,607 bp) and a small single-copy (SSC) region (17,062 bp). The circular genome contains 112 unique genes, of which 78 are protein-coding genes, 30 tRNA, and 4 rRNA genes. Phylogenetic analysis shows that E. qingchengshanense has a closer relationship with other Epimedium species. Taylor & Francis 2020-01-24 /pmc/articles/PMC7748797/ /pubmed/33366755 http://dx.doi.org/10.1080/23802359.2020.1715295 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Luo, Yanjiao
Liu, Xiang
Yu, Yao
Yang, Qianru
Guo, Baolin
Xu, Chaoqun
Suo, Fengmei
Zhang, Cheng
Shen, Guoan
Chen, Anjia
The complete chloroplast genome of Epimedium qingchengshanense G. Y. Zhong et B. L. Guo (Berberidaceae), an endangered species endemic to China
title The complete chloroplast genome of Epimedium qingchengshanense G. Y. Zhong et B. L. Guo (Berberidaceae), an endangered species endemic to China
title_full The complete chloroplast genome of Epimedium qingchengshanense G. Y. Zhong et B. L. Guo (Berberidaceae), an endangered species endemic to China
title_fullStr The complete chloroplast genome of Epimedium qingchengshanense G. Y. Zhong et B. L. Guo (Berberidaceae), an endangered species endemic to China
title_full_unstemmed The complete chloroplast genome of Epimedium qingchengshanense G. Y. Zhong et B. L. Guo (Berberidaceae), an endangered species endemic to China
title_short The complete chloroplast genome of Epimedium qingchengshanense G. Y. Zhong et B. L. Guo (Berberidaceae), an endangered species endemic to China
title_sort complete chloroplast genome of epimedium qingchengshanense g. y. zhong et b. l. guo (berberidaceae), an endangered species endemic to china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748797/
https://www.ncbi.nlm.nih.gov/pubmed/33366755
http://dx.doi.org/10.1080/23802359.2020.1715295
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