The complete chloroplast genome of Actinidia rubus (Actinidiaceae)

A complete chloroplast genome of Actinidia rubus, an endemic shrub in China, was sequenced and identified. The length of genome is 156,573 bp, and the GC content is 37.3%. This genome contains a large single copy (LSC; 88,473 bp) region, a small single copy (SSC; 20,492) region, a pair of inverted r...

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Autores principales: Xu, Yu-Sheng, Zhang, Cheng-Gui, Chen, Jun-Tong, Li, Li-Juan, Liao, Chuan-Jiang, Lv, Zhen-Yu, Jiang, Zhi-Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748799/
https://www.ncbi.nlm.nih.gov/pubmed/33366559
http://dx.doi.org/10.1080/23802359.2019.1703571
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author Xu, Yu-Sheng
Zhang, Cheng-Gui
Chen, Jun-Tong
Li, Li-Juan
Liao, Chuan-Jiang
Lv, Zhen-Yu
Jiang, Zhi-Lin
author_facet Xu, Yu-Sheng
Zhang, Cheng-Gui
Chen, Jun-Tong
Li, Li-Juan
Liao, Chuan-Jiang
Lv, Zhen-Yu
Jiang, Zhi-Lin
author_sort Xu, Yu-Sheng
collection PubMed
description A complete chloroplast genome of Actinidia rubus, an endemic shrub in China, was sequenced and identified. The length of genome is 156,573 bp, and the GC content is 37.3%. This genome contains a large single copy (LSC; 88,473 bp) region, a small single copy (SSC; 20,492) region, a pair of inverted repeat (IR; 23,804) regions. A total of 113 unique genes were identified, including 78 protein-coding genes, 31 tRNA genes and 4 rRNA genes. The phylogenetic analysis based on complete chloroplast genome of 10 species showed that Actintdia eriantha was sister to A. rubus.
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spelling pubmed-77487992020-12-22 The complete chloroplast genome of Actinidia rubus (Actinidiaceae) Xu, Yu-Sheng Zhang, Cheng-Gui Chen, Jun-Tong Li, Li-Juan Liao, Chuan-Jiang Lv, Zhen-Yu Jiang, Zhi-Lin Mitochondrial DNA B Resour Mitogenome Announcement A complete chloroplast genome of Actinidia rubus, an endemic shrub in China, was sequenced and identified. The length of genome is 156,573 bp, and the GC content is 37.3%. This genome contains a large single copy (LSC; 88,473 bp) region, a small single copy (SSC; 20,492) region, a pair of inverted repeat (IR; 23,804) regions. A total of 113 unique genes were identified, including 78 protein-coding genes, 31 tRNA genes and 4 rRNA genes. The phylogenetic analysis based on complete chloroplast genome of 10 species showed that Actintdia eriantha was sister to A. rubus. Taylor & Francis 2020-01-07 /pmc/articles/PMC7748799/ /pubmed/33366559 http://dx.doi.org/10.1080/23802359.2019.1703571 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xu, Yu-Sheng
Zhang, Cheng-Gui
Chen, Jun-Tong
Li, Li-Juan
Liao, Chuan-Jiang
Lv, Zhen-Yu
Jiang, Zhi-Lin
The complete chloroplast genome of Actinidia rubus (Actinidiaceae)
title The complete chloroplast genome of Actinidia rubus (Actinidiaceae)
title_full The complete chloroplast genome of Actinidia rubus (Actinidiaceae)
title_fullStr The complete chloroplast genome of Actinidia rubus (Actinidiaceae)
title_full_unstemmed The complete chloroplast genome of Actinidia rubus (Actinidiaceae)
title_short The complete chloroplast genome of Actinidia rubus (Actinidiaceae)
title_sort complete chloroplast genome of actinidia rubus (actinidiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748799/
https://www.ncbi.nlm.nih.gov/pubmed/33366559
http://dx.doi.org/10.1080/23802359.2019.1703571
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