Cargando…

Characterization of complete mitochondrial genome of Hylarana guentheri (Anura: Ranidae) and its phylogenetic implication

The Günther’s frog (Hylarana guentheri) belongs to a member of the family Ranidae. We provide a complete mitogenome of H. guentheri and examine its phylogenetic position with other related species. Its mitogenome is a closed circular molecule 18,698 bp in length including 13 protein coding genes, 22...

Descripción completa

Detalles Bibliográficos
Autores principales: Jiang, Lichun, Wu, Bingxiu, Luo, Jing, Xu, Zhongwen, Huang, Nenghao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748803/
https://www.ncbi.nlm.nih.gov/pubmed/33366672
http://dx.doi.org/10.1080/23802359.2019.1711216
_version_ 1783625196263964672
author Jiang, Lichun
Wu, Bingxiu
Luo, Jing
Xu, Zhongwen
Huang, Nenghao
author_facet Jiang, Lichun
Wu, Bingxiu
Luo, Jing
Xu, Zhongwen
Huang, Nenghao
author_sort Jiang, Lichun
collection PubMed
description The Günther’s frog (Hylarana guentheri) belongs to a member of the family Ranidae. We provide a complete mitogenome of H. guentheri and examine its phylogenetic position with other related species. Its mitogenome is a closed circular molecule 18,698 bp in length including 13 protein coding genes, 22 tRNA coding genes, two rRNA-coding genes, and a control region (CR) that are conserved in most Ranidae mitogenomes. The overall base composition of the H. guentheri mitogenome is 29.27% A, 30.45% T, 26.14% C, and 14.15% G, which is typical for Amphibious animals’ mitochondrial genomes. The alignment of the Ranidae species control regions showed high levels of genetic variation and abundant AT content. Seven tandem repeats were found in the control region. Phylogenetic analysis with Bayesian inference and maximum likelihood based on 13 protein-coding genes indicated that H. guentheri is more closely related to Nidirana okinavana than to Babina subaspera and B. holsti. The complete mitogenome of H. guentheri provides a potentially useful resource for further exploration of the taxonomic status and phylogenetic relationships of Hylarana and related species.
format Online
Article
Text
id pubmed-7748803
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77488032020-12-22 Characterization of complete mitochondrial genome of Hylarana guentheri (Anura: Ranidae) and its phylogenetic implication Jiang, Lichun Wu, Bingxiu Luo, Jing Xu, Zhongwen Huang, Nenghao Mitochondrial DNA B Resour Mitogenome Announcement The Günther’s frog (Hylarana guentheri) belongs to a member of the family Ranidae. We provide a complete mitogenome of H. guentheri and examine its phylogenetic position with other related species. Its mitogenome is a closed circular molecule 18,698 bp in length including 13 protein coding genes, 22 tRNA coding genes, two rRNA-coding genes, and a control region (CR) that are conserved in most Ranidae mitogenomes. The overall base composition of the H. guentheri mitogenome is 29.27% A, 30.45% T, 26.14% C, and 14.15% G, which is typical for Amphibious animals’ mitochondrial genomes. The alignment of the Ranidae species control regions showed high levels of genetic variation and abundant AT content. Seven tandem repeats were found in the control region. Phylogenetic analysis with Bayesian inference and maximum likelihood based on 13 protein-coding genes indicated that H. guentheri is more closely related to Nidirana okinavana than to Babina subaspera and B. holsti. The complete mitogenome of H. guentheri provides a potentially useful resource for further exploration of the taxonomic status and phylogenetic relationships of Hylarana and related species. Taylor & Francis 2020-01-14 /pmc/articles/PMC7748803/ /pubmed/33366672 http://dx.doi.org/10.1080/23802359.2019.1711216 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Jiang, Lichun
Wu, Bingxiu
Luo, Jing
Xu, Zhongwen
Huang, Nenghao
Characterization of complete mitochondrial genome of Hylarana guentheri (Anura: Ranidae) and its phylogenetic implication
title Characterization of complete mitochondrial genome of Hylarana guentheri (Anura: Ranidae) and its phylogenetic implication
title_full Characterization of complete mitochondrial genome of Hylarana guentheri (Anura: Ranidae) and its phylogenetic implication
title_fullStr Characterization of complete mitochondrial genome of Hylarana guentheri (Anura: Ranidae) and its phylogenetic implication
title_full_unstemmed Characterization of complete mitochondrial genome of Hylarana guentheri (Anura: Ranidae) and its phylogenetic implication
title_short Characterization of complete mitochondrial genome of Hylarana guentheri (Anura: Ranidae) and its phylogenetic implication
title_sort characterization of complete mitochondrial genome of hylarana guentheri (anura: ranidae) and its phylogenetic implication
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748803/
https://www.ncbi.nlm.nih.gov/pubmed/33366672
http://dx.doi.org/10.1080/23802359.2019.1711216
work_keys_str_mv AT jianglichun characterizationofcompletemitochondrialgenomeofhylaranaguentherianuraranidaeanditsphylogeneticimplication
AT wubingxiu characterizationofcompletemitochondrialgenomeofhylaranaguentherianuraranidaeanditsphylogeneticimplication
AT luojing characterizationofcompletemitochondrialgenomeofhylaranaguentherianuraranidaeanditsphylogeneticimplication
AT xuzhongwen characterizationofcompletemitochondrialgenomeofhylaranaguentherianuraranidaeanditsphylogeneticimplication
AT huangnenghao characterizationofcompletemitochondrialgenomeofhylaranaguentherianuraranidaeanditsphylogeneticimplication