Characterization of the complete chloroplast genome of Camellia anlungensis

Camellia anlungensis is a rare and ornamental plant. To contribute to its conservation, the complete chloroplast (cp.) genome of C. anlungensis was sequenced and assembled by high-throughput sequencing technology, and its characteristics were analyzed and clustering relationship was studied in the p...

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Autores principales: Zhu, Yayan, Xu, Jie, Wang, Gang, Yuan, Congjun, Luo, Yang, Dai, Xiaoyong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748807/
https://www.ncbi.nlm.nih.gov/pubmed/33366791
http://dx.doi.org/10.1080/23802359.2020.1716639
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author Zhu, Yayan
Xu, Jie
Wang, Gang
Yuan, Congjun
Luo, Yang
Dai, Xiaoyong
author_facet Zhu, Yayan
Xu, Jie
Wang, Gang
Yuan, Congjun
Luo, Yang
Dai, Xiaoyong
author_sort Zhu, Yayan
collection PubMed
description Camellia anlungensis is a rare and ornamental plant. To contribute to its conservation, the complete chloroplast (cp.) genome of C. anlungensis was sequenced and assembled by high-throughput sequencing technology, and its characteristics were analyzed and clustering relationship was studied in the present study. The complete cp. genome of C. anlungensis is 156,587 bp in length, containing a LSC region of 86,262 bp, a SSC region of 18,339 bp and two IR regions of 25,993 bp. The overall A + T content of C. anlungensiscp genome is 62.7%. The annotated complete cp. genome contains 114 genes, including 80 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis suggested that C. anlungensisis grouped with C. leptophylla, C. ptilophylla, C. pubicosta, C. grandibracteata and C. sinensis.
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spelling pubmed-77488072020-12-22 Characterization of the complete chloroplast genome of Camellia anlungensis Zhu, Yayan Xu, Jie Wang, Gang Yuan, Congjun Luo, Yang Dai, Xiaoyong Mitochondrial DNA B Resour Mitogenome Announcement Camellia anlungensis is a rare and ornamental plant. To contribute to its conservation, the complete chloroplast (cp.) genome of C. anlungensis was sequenced and assembled by high-throughput sequencing technology, and its characteristics were analyzed and clustering relationship was studied in the present study. The complete cp. genome of C. anlungensis is 156,587 bp in length, containing a LSC region of 86,262 bp, a SSC region of 18,339 bp and two IR regions of 25,993 bp. The overall A + T content of C. anlungensiscp genome is 62.7%. The annotated complete cp. genome contains 114 genes, including 80 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis suggested that C. anlungensisis grouped with C. leptophylla, C. ptilophylla, C. pubicosta, C. grandibracteata and C. sinensis. Taylor & Francis 2020-02-04 /pmc/articles/PMC7748807/ /pubmed/33366791 http://dx.doi.org/10.1080/23802359.2020.1716639 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhu, Yayan
Xu, Jie
Wang, Gang
Yuan, Congjun
Luo, Yang
Dai, Xiaoyong
Characterization of the complete chloroplast genome of Camellia anlungensis
title Characterization of the complete chloroplast genome of Camellia anlungensis
title_full Characterization of the complete chloroplast genome of Camellia anlungensis
title_fullStr Characterization of the complete chloroplast genome of Camellia anlungensis
title_full_unstemmed Characterization of the complete chloroplast genome of Camellia anlungensis
title_short Characterization of the complete chloroplast genome of Camellia anlungensis
title_sort characterization of the complete chloroplast genome of camellia anlungensis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748807/
https://www.ncbi.nlm.nih.gov/pubmed/33366791
http://dx.doi.org/10.1080/23802359.2020.1716639
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