Characterization of the chloroplast genome of a rare species Polygonatum sp. in China (Asparagaceae, Asparagales)

Polygonatum (Asparagaceae) is a medicinal and food plant that is naturally distributed in most of countries throughout the temperate Northern Hemisphere. Here we report on the complete chloroplast (cp) genome sequence of a rare species Polygonatum sp. without defoliation in late autumn or winter. Th...

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Autores principales: Zhong, Can, Lao, Jia, Jin, Jian, He, Wei, Xie, Jing, Liu, Hao, Qin, You, Zhang, Shuihan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748811/
https://www.ncbi.nlm.nih.gov/pubmed/33366843
http://dx.doi.org/10.1080/23802359.2020.1720538
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author Zhong, Can
Lao, Jia
Jin, Jian
He, Wei
Xie, Jing
Liu, Hao
Qin, You
Zhang, Shuihan
author_facet Zhong, Can
Lao, Jia
Jin, Jian
He, Wei
Xie, Jing
Liu, Hao
Qin, You
Zhang, Shuihan
author_sort Zhong, Can
collection PubMed
description Polygonatum (Asparagaceae) is a medicinal and food plant that is naturally distributed in most of countries throughout the temperate Northern Hemisphere. Here we report on the complete chloroplast (cp) genome sequence of a rare species Polygonatum sp. without defoliation in late autumn or winter. The cp genome is 157,696 bp in size and includes two inverted repeat regions of 52,821bp, which is separated by a large single-copy region of 84,359 bp and a small single copy region of 20,516 bp. A total of 132 genes were predicted, including 38 tRNA, 8 rRNA, and 86 protein-coding genes. Phylogenetic analysis placed Polygonatum sp. under the subfamily Nolinoideae of the family Asparagaceae.
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spelling pubmed-77488112020-12-22 Characterization of the chloroplast genome of a rare species Polygonatum sp. in China (Asparagaceae, Asparagales) Zhong, Can Lao, Jia Jin, Jian He, Wei Xie, Jing Liu, Hao Qin, You Zhang, Shuihan Mitochondrial DNA B Resour Mitogenome Announcement Polygonatum (Asparagaceae) is a medicinal and food plant that is naturally distributed in most of countries throughout the temperate Northern Hemisphere. Here we report on the complete chloroplast (cp) genome sequence of a rare species Polygonatum sp. without defoliation in late autumn or winter. The cp genome is 157,696 bp in size and includes two inverted repeat regions of 52,821bp, which is separated by a large single-copy region of 84,359 bp and a small single copy region of 20,516 bp. A total of 132 genes were predicted, including 38 tRNA, 8 rRNA, and 86 protein-coding genes. Phylogenetic analysis placed Polygonatum sp. under the subfamily Nolinoideae of the family Asparagaceae. Taylor & Francis 2020-02-03 /pmc/articles/PMC7748811/ /pubmed/33366843 http://dx.doi.org/10.1080/23802359.2020.1720538 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhong, Can
Lao, Jia
Jin, Jian
He, Wei
Xie, Jing
Liu, Hao
Qin, You
Zhang, Shuihan
Characterization of the chloroplast genome of a rare species Polygonatum sp. in China (Asparagaceae, Asparagales)
title Characterization of the chloroplast genome of a rare species Polygonatum sp. in China (Asparagaceae, Asparagales)
title_full Characterization of the chloroplast genome of a rare species Polygonatum sp. in China (Asparagaceae, Asparagales)
title_fullStr Characterization of the chloroplast genome of a rare species Polygonatum sp. in China (Asparagaceae, Asparagales)
title_full_unstemmed Characterization of the chloroplast genome of a rare species Polygonatum sp. in China (Asparagaceae, Asparagales)
title_short Characterization of the chloroplast genome of a rare species Polygonatum sp. in China (Asparagaceae, Asparagales)
title_sort characterization of the chloroplast genome of a rare species polygonatum sp. in china (asparagaceae, asparagales)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748811/
https://www.ncbi.nlm.nih.gov/pubmed/33366843
http://dx.doi.org/10.1080/23802359.2020.1720538
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