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Characterization of the complete chloroplast genome of Platycladus orientalis (Cupressaceae), an herb to treat lumbar tuberculosis in China
Platycladus orientalis belongs to the family Cupressaceae that the branches and leaves is an important Traditional Chinese Medicine in China. In this article, the complete chloroplast genome of P. orientalis was studied and illustrated to add the more genetic information. The chloroplast genome of P...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748822/ https://www.ncbi.nlm.nih.gov/pubmed/33366496 http://dx.doi.org/10.1080/23802359.2019.1699471 |
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author | Fei, Jun Shi, Shiyuan Zu, Gang Han, Guihe Lai, Zhen Cao, Tianyi |
author_facet | Fei, Jun Shi, Shiyuan Zu, Gang Han, Guihe Lai, Zhen Cao, Tianyi |
author_sort | Fei, Jun |
collection | PubMed |
description | Platycladus orientalis belongs to the family Cupressaceae that the branches and leaves is an important Traditional Chinese Medicine in China. In this article, the complete chloroplast genome of P. orientalis was studied and illustrated to add the more genetic information. The chloroplast genome of Platycladus orientalis is 1127,113 bp in length as the circular, which exhibits 120 genes, including 83 protein-coding genes (PCG), 33 transfer RNA genes (tRNAs) and 4 ribosomal RNA genes (rRNAs). The overall nucleotide composition of chloroplast genome is: 32.1% of A, 33.2% of T, 17.9% of C, 16.8% of G and the total AT content of 65.3% and GC of 34.7%. Phylogenetic relationship shown that Platycladus orientalis is more closely related to Thuja standishii on genetic relationship using the Maximum-Likelihood (ML) method. The chloroplast genome may contribute to the medicinal valuable and evolutionary studies of this species. |
format | Online Article Text |
id | pubmed-7748822 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77488222020-12-22 Characterization of the complete chloroplast genome of Platycladus orientalis (Cupressaceae), an herb to treat lumbar tuberculosis in China Fei, Jun Shi, Shiyuan Zu, Gang Han, Guihe Lai, Zhen Cao, Tianyi Mitochondrial DNA B Resour Mitogenome Announcement Platycladus orientalis belongs to the family Cupressaceae that the branches and leaves is an important Traditional Chinese Medicine in China. In this article, the complete chloroplast genome of P. orientalis was studied and illustrated to add the more genetic information. The chloroplast genome of Platycladus orientalis is 1127,113 bp in length as the circular, which exhibits 120 genes, including 83 protein-coding genes (PCG), 33 transfer RNA genes (tRNAs) and 4 ribosomal RNA genes (rRNAs). The overall nucleotide composition of chloroplast genome is: 32.1% of A, 33.2% of T, 17.9% of C, 16.8% of G and the total AT content of 65.3% and GC of 34.7%. Phylogenetic relationship shown that Platycladus orientalis is more closely related to Thuja standishii on genetic relationship using the Maximum-Likelihood (ML) method. The chloroplast genome may contribute to the medicinal valuable and evolutionary studies of this species. Taylor & Francis 2019-12-13 /pmc/articles/PMC7748822/ /pubmed/33366496 http://dx.doi.org/10.1080/23802359.2019.1699471 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Fei, Jun Shi, Shiyuan Zu, Gang Han, Guihe Lai, Zhen Cao, Tianyi Characterization of the complete chloroplast genome of Platycladus orientalis (Cupressaceae), an herb to treat lumbar tuberculosis in China |
title | Characterization of the complete chloroplast genome of Platycladus orientalis (Cupressaceae), an herb to treat lumbar tuberculosis in China |
title_full | Characterization of the complete chloroplast genome of Platycladus orientalis (Cupressaceae), an herb to treat lumbar tuberculosis in China |
title_fullStr | Characterization of the complete chloroplast genome of Platycladus orientalis (Cupressaceae), an herb to treat lumbar tuberculosis in China |
title_full_unstemmed | Characterization of the complete chloroplast genome of Platycladus orientalis (Cupressaceae), an herb to treat lumbar tuberculosis in China |
title_short | Characterization of the complete chloroplast genome of Platycladus orientalis (Cupressaceae), an herb to treat lumbar tuberculosis in China |
title_sort | characterization of the complete chloroplast genome of platycladus orientalis (cupressaceae), an herb to treat lumbar tuberculosis in china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748822/ https://www.ncbi.nlm.nih.gov/pubmed/33366496 http://dx.doi.org/10.1080/23802359.2019.1699471 |
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