The complete mitochondrial genome of Lasiopodomys brandtii

In this study, the complete mitochondrial (mt) genome sequence of Lasiopodomys brandtii was determined using Illumina NovaSeq platform. The assembled genome was 16,557 bp in length and included 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA genes. The total nucleotide compositio...

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Detalles Bibliográficos
Autores principales: Tian, Xiangyu, Gu, Shiming, Pan, Dan, Shi, Luye, Wang, Zhenlong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748823/
https://www.ncbi.nlm.nih.gov/pubmed/33366558
http://dx.doi.org/10.1080/23802359.2019.1703567
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author Tian, Xiangyu
Gu, Shiming
Pan, Dan
Shi, Luye
Wang, Zhenlong
author_facet Tian, Xiangyu
Gu, Shiming
Pan, Dan
Shi, Luye
Wang, Zhenlong
author_sort Tian, Xiangyu
collection PubMed
description In this study, the complete mitochondrial (mt) genome sequence of Lasiopodomys brandtii was determined using Illumina NovaSeq platform. The assembled genome was 16,557 bp in length and included 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA genes. The total nucleotide composition frequencies present clearly the A-T skew (59.5%), which mostly in D-loop and PCGs regions. Whole mt genome phylogenetic analysis revealed a closely related among Lasiopodomys, Proedromys, and Microtus with high support. It would provide further evolutionary research for the subfamily Arvicolinae.
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spelling pubmed-77488232020-12-22 The complete mitochondrial genome of Lasiopodomys brandtii Tian, Xiangyu Gu, Shiming Pan, Dan Shi, Luye Wang, Zhenlong Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitochondrial (mt) genome sequence of Lasiopodomys brandtii was determined using Illumina NovaSeq platform. The assembled genome was 16,557 bp in length and included 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA genes. The total nucleotide composition frequencies present clearly the A-T skew (59.5%), which mostly in D-loop and PCGs regions. Whole mt genome phylogenetic analysis revealed a closely related among Lasiopodomys, Proedromys, and Microtus with high support. It would provide further evolutionary research for the subfamily Arvicolinae. Taylor & Francis 2020-01-07 /pmc/articles/PMC7748823/ /pubmed/33366558 http://dx.doi.org/10.1080/23802359.2019.1703567 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Tian, Xiangyu
Gu, Shiming
Pan, Dan
Shi, Luye
Wang, Zhenlong
The complete mitochondrial genome of Lasiopodomys brandtii
title The complete mitochondrial genome of Lasiopodomys brandtii
title_full The complete mitochondrial genome of Lasiopodomys brandtii
title_fullStr The complete mitochondrial genome of Lasiopodomys brandtii
title_full_unstemmed The complete mitochondrial genome of Lasiopodomys brandtii
title_short The complete mitochondrial genome of Lasiopodomys brandtii
title_sort complete mitochondrial genome of lasiopodomys brandtii
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748823/
https://www.ncbi.nlm.nih.gov/pubmed/33366558
http://dx.doi.org/10.1080/23802359.2019.1703567
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