The complete chloroplast genome of Distylium tsiangii Chun ex Walker, a rare and endangered plant

Distylium tsiangii Chun ex Walker is an evergreen tree species endemic to China. It has been classified as critically endangered in the Red List of China Higher Plants. Here, we sequenced, assembled, and analyzed the complete chloroplast (cp) genome of D. tsiangii. The plastome is 159,125 bp in leng...

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Autores principales: Xie, Lei, Wang, Lu, Zang, Mingyue, Chen, Shuifei, Li, Yao, Fang, Yanming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748841/
https://www.ncbi.nlm.nih.gov/pubmed/33366588
http://dx.doi.org/10.1080/23802359.2019.1703605
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author Xie, Lei
Wang, Lu
Zang, Mingyue
Chen, Shuifei
Li, Yao
Fang, Yanming
author_facet Xie, Lei
Wang, Lu
Zang, Mingyue
Chen, Shuifei
Li, Yao
Fang, Yanming
author_sort Xie, Lei
collection PubMed
description Distylium tsiangii Chun ex Walker is an evergreen tree species endemic to China. It has been classified as critically endangered in the Red List of China Higher Plants. Here, we sequenced, assembled, and analyzed the complete chloroplast (cp) genome of D. tsiangii. The plastome is 159,125 bp in length, with a typical quadripartite structure and consisting of a pair of inverted repeat (IR) regions (26,220 bp) separated by a large single copy (LSC) region (87,897 bp) and a small single copy (SSC) region (18,788 bp). The overall GC content was 38.00%. A total of 131 genes were annotated, including 37 tRNA genes, 86 protein-coding genes, and eight rRNA genes. Phylogenetic analysis showed that D. tsiangii was more closely related to Parrotia subaequalis.
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spelling pubmed-77488412020-12-22 The complete chloroplast genome of Distylium tsiangii Chun ex Walker, a rare and endangered plant Xie, Lei Wang, Lu Zang, Mingyue Chen, Shuifei Li, Yao Fang, Yanming Mitochondrial DNA B Resour Mitogenome Announcement Distylium tsiangii Chun ex Walker is an evergreen tree species endemic to China. It has been classified as critically endangered in the Red List of China Higher Plants. Here, we sequenced, assembled, and analyzed the complete chloroplast (cp) genome of D. tsiangii. The plastome is 159,125 bp in length, with a typical quadripartite structure and consisting of a pair of inverted repeat (IR) regions (26,220 bp) separated by a large single copy (LSC) region (87,897 bp) and a small single copy (SSC) region (18,788 bp). The overall GC content was 38.00%. A total of 131 genes were annotated, including 37 tRNA genes, 86 protein-coding genes, and eight rRNA genes. Phylogenetic analysis showed that D. tsiangii was more closely related to Parrotia subaequalis. Taylor & Francis 2020-01-08 /pmc/articles/PMC7748841/ /pubmed/33366588 http://dx.doi.org/10.1080/23802359.2019.1703605 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xie, Lei
Wang, Lu
Zang, Mingyue
Chen, Shuifei
Li, Yao
Fang, Yanming
The complete chloroplast genome of Distylium tsiangii Chun ex Walker, a rare and endangered plant
title The complete chloroplast genome of Distylium tsiangii Chun ex Walker, a rare and endangered plant
title_full The complete chloroplast genome of Distylium tsiangii Chun ex Walker, a rare and endangered plant
title_fullStr The complete chloroplast genome of Distylium tsiangii Chun ex Walker, a rare and endangered plant
title_full_unstemmed The complete chloroplast genome of Distylium tsiangii Chun ex Walker, a rare and endangered plant
title_short The complete chloroplast genome of Distylium tsiangii Chun ex Walker, a rare and endangered plant
title_sort complete chloroplast genome of distylium tsiangii chun ex walker, a rare and endangered plant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748841/
https://www.ncbi.nlm.nih.gov/pubmed/33366588
http://dx.doi.org/10.1080/23802359.2019.1703605
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